RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 OSBPL3Q9H4L5 887 aa24.82■■□□□ 1.56
NEDD8-201ENST00000250495 MROH7Q68CQ1 1323 aa24.82■■□□□ 1.56
NEDD8-201ENST00000250495 ADCY6O43306 1168 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 ITGB8P26012 769 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 HAND2P61296 217 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 FAAP100Q0VG06 881 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 MUM1L1Q5H9M0 696 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 TTBK2Q6IQ55 1244 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 NOL8Q76FK4 1167 aaKnown RBP24.81■■□□□ 1.56
NEDD8-201ENST00000250495 RASGRP2Q7LDG7 609 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 PLEKHM2Q8IWE5 1019 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 RANBP17Q9H2T7 1088 aaKnown RBP24.81■■□□□ 1.56
NEDD8-201ENST00000250495 RNF41Q9H4P4 317 aaPredicted RBP24.81■■□□□ 1.56
NEDD8-201ENST00000250495 CYP39A1Q9NYL5 469 aa24.81■■□□□ 1.56
NEDD8-201ENST00000250495 NKX3-2P78367 333 aa24.8■■□□□ 1.56
NEDD8-201ENST00000250495 NUCB1Q02818 461 aa24.8■■□□□ 1.56
NEDD8-201ENST00000250495 SYDE2Q5VT97 1194 aa24.8■■□□□ 1.56
NEDD8-201ENST00000250495 NSMFQ6X4W1 530 aa24.8■■□□□ 1.56
NEDD8-201ENST00000250495 IGHDP01880 384 aa24.79■■□□□ 1.56
NEDD8-201ENST00000250495 SLC16A2P36021 539 aa24.79■■□□□ 1.56
NEDD8-201ENST00000250495 CDK7P50613 346 aa24.79■■□□□ 1.56
NEDD8-201ENST00000250495 IRX5P78411 483 aaPredicted RBP24.79■■□□□ 1.56
NEDD8-201ENST00000250495 ZNF697Q5TEC3 545 aa24.79■■□□□ 1.56
NEDD8-201ENST00000250495 GPCPD1Q9NPB8 672 aa24.79■■□□□ 1.56
NEDD8-201ENST00000250495 PNMA2Q9UL42 364 aa24.79■■□□□ 1.56
NEDD8-201ENST00000250495 A0A0U1RQG5 324 aaPredicted RBP24.78■■□□□ 1.56
NEDD8-201ENST00000250495 NT5C2P49902 561 aa24.78■■□□□ 1.56
NEDD8-201ENST00000250495 FPGSQ05932 587 aa24.78■■□□□ 1.56
NEDD8-201ENST00000250495 IQSEC1Q6DN90 963 aa24.78■■□□□ 1.56
NEDD8-201ENST00000250495 ADD3Q9UEY8 706 aaKnown RBP24.78■■□□□ 1.56
NEDD8-201ENST00000250495 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.77■■□□□ 1.56
NEDD8-201ENST00000250495 ARVCFO00192 962 aa24.77■■□□□ 1.56
NEDD8-201ENST00000250495 ZNF213O14771 459 aa24.77■■□□□ 1.56
NEDD8-201ENST00000250495 TIMP1P01033 207 aa24.77■■□□□ 1.56
NEDD8-201ENST00000250495 PDHBP11177 359 aa24.77■■□□□ 1.56
NEDD8-201ENST00000250495 SMAD3P84022 425 aaKnown RBP24.77■■□□□ 1.56
NEDD8-201ENST00000250495 ESR2Q92731 530 aa24.77■■□□□ 1.56
NEDD8-201ENST00000250495 AP5M1Q9H0R1 490 aa24.77■■□□□ 1.56
NEDD8-201ENST00000250495 GNEQ9Y223 722 aaKnown RBP24.77■■□□□ 1.56
NEDD8-201ENST00000250495 FRMPD2Q68DX3 1309 aaPredicted RBP24.77■■□□□ 1.56
NEDD8-201ENST00000250495 HIP1O00291 1037 aa24.76■■□□□ 1.55
NEDD8-201ENST00000250495 CTAGE5O15320 804 aa24.76■■□□□ 1.55
NEDD8-201ENST00000250495 CENPBP07199 599 aaPredicted RBP24.76■■□□□ 1.55
NEDD8-201ENST00000250495 EXOC6Q8TAG9 804 aa24.76■■□□□ 1.55
NEDD8-201ENST00000250495 DIAPH3Q9NSV4 1193 aa24.76■■□□□ 1.55
NEDD8-201ENST00000250495 Q9Y3F1 56 aa24.76■■□□□ 1.55
NEDD8-201ENST00000250495 LOC102724159A0A0B4J2E5 919 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 TLR3O15455 904 aaKnown RBP24.75■■□□□ 1.55
NEDD8-201ENST00000250495 ZEB2O60315 1214 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 CABYRO75952 493 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 BEX3Q00994 111 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 BAATQ14032 418 aaPredicted RBP24.75■■□□□ 1.55
NEDD8-201ENST00000250495 PWP2Q15269 919 aaKnown RBP24.75■■□□□ 1.55
NEDD8-201ENST00000250495 CCDC178Q5BJE1 867 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 CWC27Q6UX04 472 aaKnown RBP24.75■■□□□ 1.55
NEDD8-201ENST00000250495 TLK2Q86UE8 772 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 TBC1D10CQ8IV04 446 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 MORC4Q8TE76 937 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 RNPC3Q96LT9 517 aaKnown RBP24.75■■□□□ 1.55
NEDD8-201ENST00000250495 FAM161BQ96MY7 647 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 VTA1Q9NP79 307 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 TBX21Q9UL17 535 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 ASTN1O14525 1302 aa24.75■■□□□ 1.55
NEDD8-201ENST00000250495 DYNC1LI2O43237 492 aaPredicted RBP24.74■■□□□ 1.55
NEDD8-201ENST00000250495 SMPD1P17405 629 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 EPHB4P54760 987 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 ZNF543Q08ER8 600 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 MFSD5Q6N075 450 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 TAPT1Q6NXT6 567 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 EEPD1Q7L9B9 569 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 DGKHQ86XP1 1220 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 GUCD1Q96NT3 240 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 PDGFCQ9NRA1 345 aa24.74■■□□□ 1.55
NEDD8-201ENST00000250495 SNHG28P0DPA3 235 aa24.73■■□□□ 1.55
NEDD8-201ENST00000250495 FSCN1Q16658 493 aaKnown RBP24.73■■□□□ 1.55
NEDD8-201ENST00000250495 GPATCH4Q5T3I0 446 aaKnown RBP24.73■■□□□ 1.55
NEDD8-201ENST00000250495 KIAA1211Q6ZU35 1233 aa24.73■■□□□ 1.55
NEDD8-201ENST00000250495 FBXO16Q8IX29 292 aaPredicted RBP24.73■■□□□ 1.55
NEDD8-201ENST00000250495 SEZ6LQ9BYH1 1024 aa24.73■■□□□ 1.55
NEDD8-201ENST00000250495 SEMA6BQ9H3T3 888 aa24.73■■□□□ 1.55
NEDD8-201ENST00000250495 PTPDC1A2A3K4 754 aa24.72■■□□□ 1.55
NEDD8-201ENST00000250495 NFIBO00712 420 aa24.72■■□□□ 1.55
NEDD8-201ENST00000250495 CXCL17Q6UXB2 119 aa24.72■■□□□ 1.55
NEDD8-201ENST00000250495 IQCA1Q86XH1 822 aa24.72■■□□□ 1.55
NEDD8-201ENST00000250495 FAM126BQ8IXS8 530 aa24.72■■□□□ 1.55
NEDD8-201ENST00000250495 PURBQ96QR8 312 aaKnown RBP24.72■■□□□ 1.55
NEDD8-201ENST00000250495 DDX49Q9Y6V7 483 aaKnown RBP24.72■■□□□ 1.55
NEDD8-201ENST00000250495 COL6A3P12111 3177 aa24.72■■□□□ 1.55
NEDD8-201ENST00000250495 ALDH5A1P51649 535 aaPredicted RBP24.71■■□□□ 1.55
NEDD8-201ENST00000250495 PPIGQ13427 754 aaKnown RBP eCLIP24.71■■□□□ 1.55
NEDD8-201ENST00000250495 RNF207Q6ZRF8 634 aa24.71■■□□□ 1.55
NEDD8-201ENST00000250495 MPHOSPH6Q99547 160 aaKnown RBP24.71■■□□□ 1.55
NEDD8-201ENST00000250495 ZKSCAN3Q9BRR0 538 aa24.71■■□□□ 1.55
NEDD8-201ENST00000250495 NEDD4P46934 1319 aa24.7■■□□□ 1.54
NEDD8-201ENST00000250495 WDR19Q8NEZ3 1342 aa24.7■■□□□ 1.54
NEDD8-201ENST00000250495 DLL1O00548 723 aa24.7■■□□□ 1.54
NEDD8-201ENST00000250495 TMEM199Q8N511 208 aa24.7■■□□□ 1.54
NEDD8-201ENST00000250495 SLC43A3Q8NBI5 491 aa24.7■■□□□ 1.54
NEDD8-201ENST00000250495 CLEC4DQ8WXI8 215 aa24.7■■□□□ 1.54
NEDD8-201ENST00000250495 DSCC1Q9BVC3 393 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms