RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ANTXR1Q9H6X2 564 aa14.44□□□□□ -0.1
RFPL3-201ENST00000249007 DCP1AQ9NPI6 582 aaPredicted RBP14.44□□□□□ -0.1
RFPL3-201ENST00000249007 TNKSO95271 1327 aa14.43□□□□□ -0.1
RFPL3-201ENST00000249007 LCHNA4D1U4 455 aa14.43□□□□□ -0.1
RFPL3-201ENST00000249007 DYNC1LI2O43237 492 aaPredicted RBP14.43□□□□□ -0.1
RFPL3-201ENST00000249007 RFC2P35250 354 aa14.43□□□□□ -0.1
RFPL3-201ENST00000249007 SDR42E1Q8WUS8 393 aa14.43□□□□□ -0.1
RFPL3-201ENST00000249007 KANSL2Q9H9L4 492 aa14.43□□□□□ -0.1
RFPL3-201ENST00000249007 TLR7Q9NYK1 1049 aaKnown RBP14.43□□□□□ -0.1
RFPL3-201ENST00000249007 MTUS1Q9ULD2 1270 aa14.43□□□□□ -0.1
RFPL3-201ENST00000249007 MYO15AQ9UKN7 3530 aa14.42□□□□□ -0.1
RFPL3-201ENST00000249007 ATP2A1O14983 1001 aa14.42□□□□□ -0.1
RFPL3-201ENST00000249007 GNAI2P04899 355 aa14.42□□□□□ -0.1
RFPL3-201ENST00000249007 PTGS1P23219 599 aa14.42□□□□□ -0.1
RFPL3-201ENST00000249007 PUS10Q3MIT2 529 aaKnown RBP14.42□□□□□ -0.1
RFPL3-201ENST00000249007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.42□□□□□ -0.1
RFPL3-201ENST00000249007 NUP88Q99567 741 aaPredicted RBP14.42□□□□□ -0.1
RFPL3-201ENST00000249007 SUGCTQ9HAC7 445 aa14.42□□□□□ -0.1
RFPL3-201ENST00000249007 FBXO40Q9UH90 709 aa14.42□□□□□ -0.1
RFPL3-201ENST00000249007 CTDP1Q9Y5B0 961 aaPredicted RBP14.42□□□□□ -0.1
RFPL3-201ENST00000249007 TECTAO75443 2155 aa14.41□□□□□ -0.1
RFPL3-201ENST00000249007 BAIAP3O94812 1187 aa14.41□□□□□ -0.1
RFPL3-201ENST00000249007 SMPD1P17405 629 aa14.41□□□□□ -0.1
RFPL3-201ENST00000249007 KCNJ6P48051 423 aa14.41□□□□□ -0.1
RFPL3-201ENST00000249007 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
RFPL3-201ENST00000249007 PRPF38AQ8NAV1 312 aaKnown RBP14.41□□□□□ -0.1
RFPL3-201ENST00000249007 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
RFPL3-201ENST00000249007 FAM186AA6NE01 2351 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 ZBED4O75132 1171 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 CNTN2Q02246 1040 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
RFPL3-201ENST00000249007 ZP2Q05996 745 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 RETREG2Q8NC44 543 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 CHST13Q8NET6 341 aa14.4□□□□□ -0.1
RFPL3-201ENST00000249007 RAVER2Q9HCJ3 691 aaKnown RBP14.4□□□□□ -0.1
RFPL3-201ENST00000249007 H3BQ06 376 aaPredicted RBP14.39□□□□□ -0.11
RFPL3-201ENST00000249007 IQCF3P0C7M6 154 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 CDK8P49336 464 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 PTPN5P54829 565 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 SLC9C2Q5TAH2 1124 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.39□□□□□ -0.11
RFPL3-201ENST00000249007 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
RFPL3-201ENST00000249007 CCDC8Q9H0W5 538 aaPredicted RBP14.39□□□□□ -0.11
RFPL3-201ENST00000249007 HOMER2Q9NSB8 354 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 WDR87Q6ZQQ6 2873 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 DCHS1Q96JQ0 3298 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 TANC1Q9C0D5 1861 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 PTPRSQ13332 1948 aa14.39□□□□□ -0.11
RFPL3-201ENST00000249007 MYO7AQ13402 2215 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 ASB14A6NK59 587 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 PDE6AP16499 860 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 ERVK-21P61565 698 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 SLFN5Q08AF3 891 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 TMCO2Q7Z6W1 182 aaPredicted RBP14.38□□□□□ -0.11
RFPL3-201ENST00000249007 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 FAM133AQ8N9E0 248 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 PRSS33Q8NF86 280 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 NEK9Q8TD19 979 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
RFPL3-201ENST00000249007 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 FAM50BQ9Y247 325 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 Q9Y3F1 56 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 CACNA1BQ00975 2339 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 SURF6O75683 361 aaKnown RBP14.38□□□□□ -0.11
RFPL3-201ENST00000249007 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
RFPL3-201ENST00000249007 FAM47CQ5HY64 1035 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 IQSEC1Q6DN90 963 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 KIFC2Q96AC6 838 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 EAF2Q96CJ1 260 aaPredicted RBP14.38□□□□□ -0.11
RFPL3-201ENST00000249007 SLC38A10Q9HBR0 1119 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 PDGFCQ9NRA1 345 aa14.38□□□□□ -0.11
RFPL3-201ENST00000249007 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
RFPL3-201ENST00000249007 SIP14410 1827 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 CYP2D7A0A087X1C5 515 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 GFRA3O60609 400 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 C16orf86Q6ZW13 317 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 EEPD1Q7L9B9 569 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 ADHFE1Q8IWW8 467 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 FBXO16Q8IX29 292 aaPredicted RBP14.37□□□□□ -0.11
RFPL3-201ENST00000249007 AMOTL1Q8IY63 956 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 COG6Q9Y2V7 657 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
RFPL3-201ENST00000249007 ZNF532Q9HCE3 1301 aa14.37□□□□□ -0.11
RFPL3-201ENST00000249007 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 EPG5Q9HCE0 2579 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 SOWAHBA6NEL2 793 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 USP17L12C9JPN9 530 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 USP17L21D6R901 530 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 F5H6K3 240 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 NDUFB10O96000 172 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 OAZ1P54368 228 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 PURAQ00577 322 aaKnown RBP14.36□□□□□ -0.11
RFPL3-201ENST00000249007 KLRC3Q07444 240 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 BFSP2Q13515 415 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 POLA2Q14181 598 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms