RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 MTFR1Q15390 333 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 RTN1Q16799 776 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 NSMFQ6X4W1 530 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 FBXO11Q86XK2 927 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 TRIB2Q92519 343 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 MTMR8Q96EF0 704 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 MAP3K14Q99558 947 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 NCOA5Q9HCD5 579 aaKnown RBP12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 CENPFP49454 3210 aa12.9□□□□□ -0.34
TUBBP1-201ENST00000248151 AK2P54819 239 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 IRF5Q13568 498 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 SOCS4Q8WXH5 440 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 CLEC4DQ8WXI8 215 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
TUBBP1-201ENST00000248151 ZBTB5O15062 677 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 CYP2C19P33261 490 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 COPB2P35606 906 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 GNAQP50148 359 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 BAATQ14032 418 aaPredicted RBP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 TMTC3Q6ZXV5 915 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 PCDHA1Q9Y5I3 950 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 INHAP05111 366 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 XRCC5P13010 732 aaKnown RBP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 CALML3P27482 149 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 RBM25P49756 843 aaKnown RBP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 ABRAQ8N0Z2 381 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 PXYLP1Q8TE99 480 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 IL17RAQ96F46 866 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 MAML3Q96JK9 1138 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 APBA2Q99767 749 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
TUBBP1-201ENST00000248151 HTTP42858 3142 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 LARGE1O95461 756 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 HOXC6P09630 235 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 EVCP57679 992 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 CACNB2Q08289 660 aaPredicted RBP12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 FUT2Q10981 343 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 SLC30A10Q6XR72 485 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 PHKBQ93100 1093 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 ZNF333Q96JL9 665 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 FGD4Q96M96 766 aa12.87□□□□□ -0.35
TUBBP1-201ENST00000248151 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 ABCB11O95342 1321 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 ZNF236Q9UL36 1845 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 OPLAHO14841 1288 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 CFBP00751 764 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 CCL5P13501 91 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 CCND3P30281 292 aaPredicted RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 SOX10P56693 466 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 TRPV1Q8NER1 839 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 ZNF274Q96GC6 653 aaPredicted RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 RNF208Q9H0X6 261 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 ALDH8A1Q9H2A2 487 aaPredicted RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 SLC5A4Q9NY91 659 aa12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 MRPL11Q9Y3B7 192 aaKnown RBP12.86□□□□□ -0.35
TUBBP1-201ENST00000248151 ASTN1O14525 1302 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 CNTNAP5Q8WYK1 1306 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 HMGCRP04035 888 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 CNGA1P29973 690 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 UBXN2AP68543 259 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 SCRN1Q12765 414 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 NTRK3Q16288 839 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 ME3Q16798 604 aa12.85□□□□□ -0.35
TUBBP1-201ENST00000248151 MFSD14CQ5VZR4 134 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms