RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 ZBTB5O15062 677 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 RAD21O60216 631 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
DDX49-201ENST00000247003 TECP42680 631 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
DDX49-201ENST00000247003 SLC15A2Q16348 729 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 AOC3Q16853 763 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 NAALADL2Q58DX5 795 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 KCNQ5Q9NR82 932 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 KBTBD4Q9NVX7 518 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 TMEM260Q9NX78 707 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 ZNF646O15015 1829 aaPredicted RBP17.02■□□□□ 0.32
DDX49-201ENST00000247003 SIPA1L1O43166 1804 aa17.02■□□□□ 0.32
DDX49-201ENST00000247003 STX10O60499 249 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 PLCG1P19174 1290 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 CHRNA5P30532 468 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 TNNI2P48788 182 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 CACNB3P54284 484 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 PLIN2Q99541 437 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 NAP1L4Q99733 375 aaKnown RBP17.02■□□□□ 0.31
DDX49-201ENST00000247003 ADD3Q9UEY8 706 aaKnown RBP17.02■□□□□ 0.31
DDX49-201ENST00000247003 SCN9AQ15858 1988 aa17.02■□□□□ 0.31
DDX49-201ENST00000247003 GOLGA6L9A6NEM1 432 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 AKR1B15C9JRZ8 316 aaPredicted RBP17.01■□□□□ 0.31
DDX49-201ENST00000247003 PSMA7O14818 248 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 PPP1R2P41236 205 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 KMT5BQ4FZB7 885 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 TMEM179Q6ZVK1 233 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 KCTD1Q719H9 257 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
DDX49-201ENST00000247003 CTIFO43310 598 aaKnown RBP17■□□□□ 0.31
DDX49-201ENST00000247003 RHOBTB3O94955 611 aa17■□□□□ 0.31
DDX49-201ENST00000247003 TXKP42681 527 aa17■□□□□ 0.31
DDX49-201ENST00000247003 SLC1A4P43007 532 aa17■□□□□ 0.31
DDX49-201ENST00000247003 ZFPM1Q8IX07 1006 aa17■□□□□ 0.31
DDX49-201ENST00000247003 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
DDX49-201ENST00000247003 PDCL3Q9H2J4 239 aa17■□□□□ 0.31
DDX49-201ENST00000247003 DNAJC18Q9H819 358 aa17■□□□□ 0.31
DDX49-201ENST00000247003 EXOC1Q9NV70 894 aa17■□□□□ 0.31
DDX49-201ENST00000247003 LRWD1Q9UFC0 647 aa17■□□□□ 0.31
DDX49-201ENST00000247003 FAM198AQ9UFP1 575 aa17■□□□□ 0.31
DDX49-201ENST00000247003 LIMA1Q9UHB6 759 aaKnown RBP17■□□□□ 0.31
DDX49-201ENST00000247003 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
DDX49-201ENST00000247003 H7C1D1 291 aa17■□□□□ 0.31
DDX49-201ENST00000247003 N4BP3O15049 544 aa17■□□□□ 0.31
DDX49-201ENST00000247003 PPIP5K2O43314 1243 aa17■□□□□ 0.31
DDX49-201ENST00000247003 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
DDX49-201ENST00000247003 SLC16A2P36021 539 aa17■□□□□ 0.31
DDX49-201ENST00000247003 PRCPP42785 496 aa17■□□□□ 0.31
DDX49-201ENST00000247003 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
DDX49-201ENST00000247003 ICA1Q05084 483 aa17■□□□□ 0.31
DDX49-201ENST00000247003 GOLGA8FQ08AF8 430 aa17■□□□□ 0.31
DDX49-201ENST00000247003 GOLGA8DPQ0D2H9 430 aa17■□□□□ 0.31
DDX49-201ENST00000247003 GRIPAP1Q4V328 841 aa17■□□□□ 0.31
DDX49-201ENST00000247003 ADSSL1Q8N142 457 aa17■□□□□ 0.31
DDX49-201ENST00000247003 TC2NQ8N9U0 490 aa17■□□□□ 0.31
DDX49-201ENST00000247003 NAA15Q9BXJ9 866 aaKnown RBP17■□□□□ 0.31
DDX49-201ENST00000247003 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
DDX49-201ENST00000247003 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.31
DDX49-201ENST00000247003 ITIH6Q6UXX5 1313 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 KCNJ18B7U540 433 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 MARCH6O60337 910 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 ENTPD3O75355 529 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 GCFC2P16383 781 aaKnown RBP16.99■□□□□ 0.31
DDX49-201ENST00000247003 ADKP55263 362 aaKnown RBP16.99■□□□□ 0.31
DDX49-201ENST00000247003 KCNJ12Q14500 433 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 SYCP1Q15431 976 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 SLFN13Q68D06 897 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 APTXQ7Z2E3 356 aaKnown RBP16.99■□□□□ 0.31
DDX49-201ENST00000247003 CNGA4Q8IV77 575 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 MKL1Q969V6 931 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 PANX2Q96RD6 677 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 PSTPIP2Q9H939 334 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 MAGEC2Q9UBF1 373 aaPredicted RBP16.99■□□□□ 0.31
DDX49-201ENST00000247003 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
DDX49-201ENST00000247003 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
DDX49-201ENST00000247003 FAM196BA6NMK8 535 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 TEX33O43247 280 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 CCT6AP40227 531 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 ASIC1P78348 528 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 SF3B2Q13435 895 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 TRIM14Q14142 442 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 KRT31Q15323 416 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 TCP11X2Q5H9J9 407 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 PPP4R3AQ6IN85 833 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms