RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ATP2C1P98194 919 aaPredicted RBP21.32■■□□□ 1
TNFSF9-201ENST00000245817 SHC4Q6S5L8 630 aa21.32■■□□□ 1
TNFSF9-201ENST00000245817 GAS2L3Q86XJ1 694 aa21.32■■□□□ 1
TNFSF9-201ENST00000245817 TBCKQ8TEA7 893 aa21.32■■□□□ 1
TNFSF9-201ENST00000245817 SDF4Q9BRK5 362 aa21.32■■□□□ 1
TNFSF9-201ENST00000245817 TMEM260Q9NX78 707 aa21.32■■□□□ 1
TNFSF9-201ENST00000245817 C19orf81C9J6K1 198 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 IREB2P48200 963 aaKnown RBP21.31■■□□□ 1
TNFSF9-201ENST00000245817 LETM2Q2VYF4 491 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.31■■□□□ 1
TNFSF9-201ENST00000245817 TANGO6Q9C0B7 1094 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 RANBP17Q9H2T7 1088 aaKnown RBP21.31■■□□□ 1
TNFSF9-201ENST00000245817 CSADQ9Y600 493 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 ATAD5Q96QE3 1844 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 WNT7AO00755 349 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 CCNT1O60563 726 aaKnown RBP21.31■■□□□ 1
TNFSF9-201ENST00000245817 ZNF202O95125 648 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 MRE11P49959 708 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 UBE2SQ16763 222 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 ARL6IP4Q66PJ3 421 aaKnown RBP21.31■■□□□ 1
TNFSF9-201ENST00000245817 CCDC174Q6PII3 467 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 LDHDQ86WU2 507 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 PRPF38AQ8NAV1 312 aaKnown RBP21.31■■□□□ 1
TNFSF9-201ENST00000245817 SLF1Q9BQI6 1058 aa21.31■■□□□ 1
TNFSF9-201ENST00000245817 CTDP1Q9Y5B0 961 aaPredicted RBP21.31■■□□□ 1
TNFSF9-201ENST00000245817 LAD1O00515 517 aa21.3■■□□□ 1
TNFSF9-201ENST00000245817 POTEIP0CG38 1075 aa21.3■■□□□ 1
TNFSF9-201ENST00000245817 POTEJP0CG39 1038 aa21.3■■□□□ 1
TNFSF9-201ENST00000245817 ORC2Q13416 577 aaPredicted RBP21.3■■□□□ 1
TNFSF9-201ENST00000245817 CSRNP2Q9H175 543 aa21.3■■□□□ 1
TNFSF9-201ENST00000245817 EMILIN3Q9NT22 766 aa21.3■■□□□ 1
TNFSF9-201ENST00000245817 KCNH3Q9ULD8 1083 aa21.3■■□□□ 1
TNFSF9-201ENST00000245817 CCDC192P0DO97 292 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 CLK2P49760 499 aaKnown RBP21.29■■□□□ 1
TNFSF9-201ENST00000245817 CKAP2LQ8IYA6 745 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 GRPEL1Q9HAV7 217 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 FBXO28Q9NVF7 368 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 TMOD4Q9NZQ9 345 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 MRVI1Q9Y6F6 885 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 SSC5DA1L4H1 1573 aa21.29■■□□□ 1
TNFSF9-201ENST00000245817 FAM237AA0A1B0GTK4 181 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 VWA3AA6NCI4 1184 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 KIF3CO14782 793 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 FLOT1O75955 427 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 VCAM1P19320 739 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 AP3B2Q13367 1082 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 TTLL12Q14166 644 aaPredicted RBP21.28■■□□□ 1
TNFSF9-201ENST00000245817 SPECC1Q5M775 1068 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 SASS6Q6UVJ0 657 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 CDCA5Q96FF9 252 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 NAP1L4Q99733 375 aaKnown RBP21.28■■□□□ 1
TNFSF9-201ENST00000245817 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
TNFSF9-201ENST00000245817 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.28■■□□□ 1
TNFSF9-201ENST00000245817 HPSEQ9Y251 543 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 MRPL11Q9Y3B7 192 aaKnown RBP21.28■■□□□ 1
TNFSF9-201ENST00000245817 DOCK1Q14185 1865 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L15C9J2P7 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L13C9JLJ4 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L11C9JVI0 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L18D6R9N7 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L22D6RA61 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L17D6RBQ6 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L19D6RCP7 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L20D6RJB6 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 GRIN1Q05586 938 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L24Q0WX57 530 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 USP17L6PQ6QN14 398 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 DLK2Q6UY11 383 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 DTHD1Q6ZMT9 781 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 TEX2Q8IWB9 1127 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 TIGD1Q96MW7 591 aa21.28■■□□□ 1
TNFSF9-201ENST00000245817 NEMFO60524 1076 aa21.27■■□□□ 1
TNFSF9-201ENST00000245817 FOSP01100 380 aaPredicted RBP21.27■■□□□ 1
TNFSF9-201ENST00000245817 VGLL4Q14135 290 aa21.27■■□□□ 1
TNFSF9-201ENST00000245817 RBM46Q8TBY0 533 aaKnown RBP21.27■■□□□ 1
TNFSF9-201ENST00000245817 SPDYE3A6NKU9 549 aa21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 HMGCS2P54868 508 aa21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 RBM43Q6ZSC3 357 aaKnown RBP21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 CCDC34Q96HJ3 373 aa21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 HOOK1Q9UJC3 728 aaKnown RBP21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 PNMA2Q9UL42 364 aa21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 ABCB11O95342 1321 aa21.26■□□□□ 0.99
TNFSF9-201ENST00000245817 ZBED4O75132 1171 aa21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 FDX1P10109 184 aa21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 LONP1P36776 959 aaKnown RBP21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 PRPHP41219 470 aa21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 ZRSR1Q15695 479 aaKnown RBP21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 MAP1SQ66K74 1059 aaPredicted RBP21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 C4orf32Q8N8J7 132 aa21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 C12orf42Q96LP6 360 aa21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 AFG3L2Q9Y4W6 797 aa21.25■□□□□ 0.99
TNFSF9-201ENST00000245817 MEIS2O14770 477 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 ICAM1P05362 532 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 OR52Z1P0C646 297 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 TXLNAP40222 546 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 DGKZQ13574 1117 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 CHADLQ6NUI6 762 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 ARMC9Q7Z3E5 817 aa21.24■□□□□ 0.99
TNFSF9-201ENST00000245817 ANKRD13AQ8IZ07 590 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms