RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DLK2Q6UY11 383 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 RNF214Q8ND24 703 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 KIFC2Q96AC6 838 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 LAD1O00515 517 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 MEIS2O14770 477 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 CCNT1O60563 726 aaKnown RBP17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP2O75604 605 aaPredicted RBP17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 SPP2Q13103 211 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 ORC2Q13416 577 aaPredicted RBP17.31■□□□□ 0.36
HDHD3-201ENST00000238379 MTMR2Q13614 643 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USH1GQ495M9 461 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 LONRF3Q496Y0 759 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
HDHD3-201ENST00000238379 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 EPSTI1Q96J88 318 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 PICK1Q9NRD5 415 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 EMILIN3Q9NT22 766 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
HDHD3-201ENST00000238379 OPLAHO14841 1288 aa17.3■□□□□ 0.36
HDHD3-201ENST00000238379 EPHX2P34913 555 aa17.3■□□□□ 0.36
HDHD3-201ENST00000238379 DGKZQ13574 1117 aa17.3■□□□□ 0.36
HDHD3-201ENST00000238379 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
HDHD3-201ENST00000238379 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
HDHD3-201ENST00000238379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■■■□□ 18.5
HDHD3-201ENST00000238379 ADM5C9JUS6 153 aa17.29■□□□□ 0.36
HDHD3-201ENST00000238379 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
HDHD3-201ENST00000238379 TAL1P17542 331 aaPredicted RBP17.29■□□□□ 0.36
HDHD3-201ENST00000238379 PRPHP41219 470 aa17.29■□□□□ 0.36
HDHD3-201ENST00000238379 TRAF1Q13077 416 aa17.29■□□□□ 0.36
HDHD3-201ENST00000238379 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
HDHD3-201ENST00000238379 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
HDHD3-201ENST00000238379 ERCC4Q92889 916 aaPredicted RBP17.29■□□□□ 0.36
HDHD3-201ENST00000238379 AS3MTQ9HBK9 375 aa17.29■□□□□ 0.36
HDHD3-201ENST00000238379 LONP1P36776 959 aaKnown RBP17.28■□□□□ 0.36
HDHD3-201ENST00000238379 USP14P54578 494 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 BACE1P56817 501 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 KRT26Q7Z3Y9 468 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
HDHD3-201ENST00000238379 ZC3H15Q8WU90 426 aaKnown RBP17.28■□□□□ 0.36
HDHD3-201ENST00000238379 KIAA1468Q9P260 1216 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 A0A087X0B3 334 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 NEMFO60524 1076 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 VCAM1P19320 739 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 PRKG1Q13976 671 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 MCTP2Q6DN12 878 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
HDHD3-201ENST00000238379 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
HDHD3-201ENST00000238379 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
HDHD3-201ENST00000238379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
HDHD3-201ENST00000238379 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
HDHD3-201ENST00000238379 AP3B2Q13367 1082 aa17.27■□□□□ 0.36
HDHD3-201ENST00000238379 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
HDHD3-201ENST00000238379 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
HDHD3-201ENST00000238379 PDILTQ8N807 584 aa17.27■□□□□ 0.36
HDHD3-201ENST00000238379 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
HDHD3-201ENST00000238379 SMCHD1A6NHR9 2005 aa17.27■□□□□ 0.35
HDHD3-201ENST00000238379 ACTN4O43707 911 aaKnown RBP17.26■□□□□ 0.35
HDHD3-201ENST00000238379 TDP2O95551 362 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 MDM2Q00987 491 aaPredicted RBP17.26■□□□□ 0.35
HDHD3-201ENST00000238379 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.26■□□□□ 0.35
HDHD3-201ENST00000238379 TEX2Q8IWB9 1127 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 CRYGNQ8WXF5 182 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 SERTAD1Q9UHV2 236 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 ZNF536O15090 1300 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 POTECB2RU33 542 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 PIK3CDO00329 1044 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
HDHD3-201ENST00000238379 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 C12orf42Q96LP6 360 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 MTMR9Q96QG7 549 aa17.26■□□□□ 0.35
HDHD3-201ENST00000238379 PHIPQ8WWQ0 1821 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 C19orf81C9J6K1 198 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 SLC37A4O43826 429 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 FOSP01100 380 aaPredicted RBP17.25■□□□□ 0.35
HDHD3-201ENST00000238379 STX1AQ16623 288 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 TANGO6Q9C0B7 1094 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
HDHD3-201ENST00000238379 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
HDHD3-201ENST00000238379 TUBE1Q9UJT0 475 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 SNCAIPQ9Y6H5 919 aa17.25■□□□□ 0.35
HDHD3-201ENST00000238379 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms