RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GYPCP04921 128 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 PPP1R2P41236 205 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 FXR2P51116 673 aaKnown RBP eCLIP18.19■□□□□ 0.5
UBE3D-201ENST00000237186 FKBP1AP62942 108 aaKnown RBP18.19■□□□□ 0.5
UBE3D-201ENST00000237186 STIM1Q13586 685 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 TRIM14Q14142 442 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 KCNJ12Q14500 433 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 COBLL1Q53SF7 1204 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
UBE3D-201ENST00000237186 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
UBE3D-201ENST00000237186 DHTKD1Q96HY7 919 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-201ENST00000237186 CCDC17Q96LX7 622 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 TMX4Q9H1E5 349 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-201ENST00000237186 FRMPD2Q68DX3 1309 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-201ENST00000237186 EDIL3O43854 480 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 EEF1GP26641 437 aaKnown RBP18.18■□□□□ 0.5
UBE3D-201ENST00000237186 AMPD3Q01432 767 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 JAKMIP3Q5VZ66 844 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
UBE3D-201ENST00000237186 MMTAG2Q9BU76 263 aaKnown RBP18.18■□□□□ 0.5
UBE3D-201ENST00000237186 THAP9Q9H5L6 903 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 JMJD4Q9H9V9 463 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 RGPD3A6NKT7 1758 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-201ENST00000237186 RGPD4Q7Z3J3 1758 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 MMP10P09238 476 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 CCDC175P0C221 793 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 CASP14P31944 242 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 ADCY7P51828 1080 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 DOK7Q18PE1 504 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 MTMR8Q96EF0 704 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 ZDHHC15Q96MV8 337 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 RIC8AQ9NPQ8 531 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 ADGRG1Q9Y653 693 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 PARP3Q9Y6F1 533 aa18.18■□□□□ 0.5
UBE3D-201ENST00000237186 ANKRD31Q8N7Z5 1873 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 A0A1W2PQC6 194 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 PSMA7O14818 248 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 TPM1P09493 284 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
UBE3D-201ENST00000237186 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBE3D-201ENST00000237186 HDLBPQ00341 1268 aaKnown RBP18.17■□□□□ 0.5
UBE3D-201ENST00000237186 PDIA5Q14554 519 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 PPP4R3AQ6IN85 833 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 TTI2Q6NXR4 508 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
UBE3D-201ENST00000237186 CCDC47Q96A33 483 aaKnown RBP18.17■□□□□ 0.5
UBE3D-201ENST00000237186 COA7Q96BR5 231 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 MXD3Q9BW11 206 aa18.17■□□□□ 0.5
UBE3D-201ENST00000237186 COBLO75128 1261 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
UBE3D-201ENST00000237186 TECP42680 631 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 CLK2P49760 499 aaKnown RBP18.16■□□□□ 0.5
UBE3D-201ENST00000237186 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 RAD9BQ6WBX8 426 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 TMTC1Q8IUR5 882 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 MKL1Q969V6 931 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 VPS16Q9H269 839 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 TMEM260Q9NX78 707 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 MAPK8IP1Q9UQF2 711 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 SOWAHDA6NJG2 315 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 CRKP46108 304 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 SCNN1DP51172 638 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 PMS1P54277 932 aaKnown RBP18.16■□□□□ 0.5
UBE3D-201ENST00000237186 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
UBE3D-201ENST00000237186 STRIP1Q5VSL9 837 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 ZNF507Q8TCN5 953 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 CALML4Q96GE6 196 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 PLIN2Q99541 437 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
UBE3D-201ENST00000237186 GPCPD1Q9NPB8 672 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 TAB2Q9NYJ8 693 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
UBE3D-201ENST00000237186 HOXA7P31268 230 aaPredicted RBP18.15■□□□□ 0.5
UBE3D-201ENST00000237186 GNG11P61952 73 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 MAP3K9P80192 1104 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
UBE3D-201ENST00000237186 MTF1Q14872 753 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 CALCRLQ16602 461 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 CPLX3Q8WVH0 158 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 CAMKK2Q96RR4 588 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 IDI2Q9BXS1 227 aa18.15■□□□□ 0.5
UBE3D-201ENST00000237186 TRIM49BA6NDI0 452 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 LGALS16A8MUM7 142 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 G3V3G9 751 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 ZBTB5O15062 677 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 CCNE1P24864 410 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 CASQ1P31415 396 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 EIF6P56537 245 aaKnown RBP18.14■□□□□ 0.49
UBE3D-201ENST00000237186 NFIAQ12857 509 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 ELF2Q15723 593 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 DCAF8Q5TAQ9 597 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 KIFC2Q96AC6 838 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 RAB34Q9BZG1 259 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 MRPL44Q9H9J2 332 aaKnown RBP18.14■□□□□ 0.49
UBE3D-201ENST00000237186 ABHD10Q9NUJ1 306 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms