RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CRACR2AQ9BSW2 395 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 EHD4Q9H223 541 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 REXO2Q9Y3B8 237 aaKnown RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 A0A087WUV0 522 aaPredicted RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 VSNL1P62760 191 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 UBXN1Q04323 297 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 SGIP1Q9BQI5 828 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 BRIP1Q9BX63 1249 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 TFCP2L1Q9NZI6 479 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 RWDD2AQ9UIY3 292 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 MTMR7Q9Y216 660 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 ENC1O14682 589 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 SEMA3EO15041 775 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 FGRP09769 529 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 MECOMQ03112 1051 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 NSUN4Q96CB9 384 aaKnown RBP10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 HDAC6Q9UBN7 1215 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 MINPP1Q9UNW1 487 aa10.52□□□□□ -0.72
HLA-DOA-201ENST00000229829 ITIH6Q6UXX5 1313 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 TTC26A0AVF1 554 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 PES1O00541 588 aaKnown RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 ZEB2O60315 1214 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 BMP15O95972 392 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 FECHP22830 423 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 PRDX5P30044 214 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 HNRNPH1P31943 449 aaKnown RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 NF2P35240 595 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 SIK1P57059 783 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 ACTN3Q08043 901 aaPredicted RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 PARP10Q53GL7 1025 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 TMTC1Q8IUR5 882 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 ANKRD18AQ8IVF6 992 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 CEP112Q8N8E3 955 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 C4orf32Q8N8J7 132 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 BCAS4Q8TDM0 211 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 DONSONQ9NYP3 566 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 GUCA1BQ9UMX6 200 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 TTF2Q9UNY4 1162 aaKnown RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 RAD21O60216 631 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 BRD3Q15059 726 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 NAALADL2Q58DX5 795 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 ZNF658Q5TYW1 1059 aaPredicted RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 GSPT2Q8IYD1 628 aaKnown RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 LRRC15Q8TF66 581 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 N4BP2L2Q92802 583 aaPredicted RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 CAPZA3Q96KX2 299 aa10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 GNL3LQ9NVN8 582 aaKnown RBP10.52□□□□□ -0.73
HLA-DOA-201ENST00000229829 SHTN1A0MZ66 631 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 PPFIA4O75335 1185 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 DDAH1O94760 285 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CALM1P0DP23 149 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CALM2P0DP24 149 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CALM3P0DP25 149 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 PEX19P40855 299 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 SF3A3Q12874 501 aaKnown RBP eCLIP10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 PFKFB3Q16875 520 aaPredicted RBP10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CAVIN4Q5BKX8 364 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CYP26C1Q6V0L0 522 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 SLC51AQ86UW1 340 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 KAT2BQ92831 832 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 NAPGQ99747 312 aaPredicted RBP10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 TMEM60Q9H2L4 133 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 FAM169AQ9Y6X4 670 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 NKRFO15226 690 aaKnown RBP eCLIP10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 MSANTD4Q8NCY6 345 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CCDC51Q96ER9 411 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CAMKK2Q96RR4 588 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 CD248Q9HCU0 757 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 RAB21Q9UL25 225 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 L1RE1Q9UN81 338 aa10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 EPN1Q9Y6I3 576 aaPredicted RBP10.51□□□□□ -0.73
HLA-DOA-201ENST00000229829 TSPY2A6NKD2 308 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 MYO1FO00160 1098 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 SRGAP2O75044 1071 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 STAT6P42226 847 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 UBE4AQ14139 1066 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 CTAGE15A4D2H0 777 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 NDUFA10O95299 355 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 CTAGE8P0CG41 777 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 MRPS25P82663 173 aaKnown RBP10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 AMPD2Q01433 879 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 TMED8Q6PL24 325 aaPredicted RBP10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 CTAGE6Q86UF2 777 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 CTAGE4Q8IX94 777 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 CAGE1Q8TC20 777 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms