RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 STXBP4Q6ZWJ1 553 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 FAM212AQ96EL1 285 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 SLAIN2Q9P270 581 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 EPB41P11171 864 aaKnown RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 CYP2J2P51589 502 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 DPH6Q7L8W6 267 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 ANKRD42Q8N9B4 389 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 NOA1Q8NC60 698 aaKnown RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 RASAL2Q9UJF2 1139 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 NFU1Q9UMS0 254 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 UTP11Q9Y3A2 253 aaKnown RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 RPL13P26373 211 aaKnown RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 LONP1P36776 959 aaKnown RBP15.18■□□□□ 0.02
NFKB1-201ENST00000226574 GGCXP38435 758 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 GTF2IP78347 998 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 ADAM9Q13443 819 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 E2F5Q15329 346 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 FAM26FQ5R3K3 315 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 SMARCAL1Q9NZC9 954 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 KIAA1024Q9UPX6 916 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 CHD1O14646 1710 aa15.18■□□□□ 0.02
NFKB1-201ENST00000226574 CFBP00751 764 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 HARSP12081 509 aaKnown RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 SCNN1DP51172 638 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 RPGRIP1Q96KN7 1286 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 ATP1A1P05023 1023 aaKnown RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 CCDC172P0C7W6 258 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 PLA2G4AP47712 749 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 FAM98CQ17RN3 349 aaKnown RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 PRR16Q569H4 304 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 TPH2Q8IWU9 490 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 MB21D1Q8N884 522 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 LRRC45Q96CN5 670 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 PACSIN2Q9UNF0 486 aaPredicted RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 PPRC1Q5VV67 1664 aaKnown RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 MEIS1O00470 390 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 CRKLP46109 303 aaKnown RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.022e-10■■■■□ 24.7
NFKB1-201ENST00000226574 FAM133AQ8N9E0 248 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 TCHPQ9BT92 498 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 ALDH8A1Q9H2A2 487 aaPredicted RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 MTRF1LQ9UGC7 380 aaKnown RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 CAPN12Q6ZSI9 719 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 CCDC105Q8IYK2 499 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
NFKB1-201ENST00000226574 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 ATG3Q9NT62 314 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
NFKB1-201ENST00000226574 ARHGAP31Q2M1Z3 1444 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 EXOC3O60645 756 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 PIGSQ96S52 555 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
NFKB1-201ENST00000226574 ASIC3Q9UHC3 531 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 DNM3Q9UQ16 869 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 STK38LQ9Y2H1 464 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 JRKLQ9Y4A0 524 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 BACH1O14867 736 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 ZBTB16Q05516 673 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 CCDC6Q16204 474 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 BPIFA3Q9BQP9 254 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 PANK4Q9NVE7 773 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 HECW2Q9P2P5 1572 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 FBXO2Q9UK22 296 aaPredicted RBP15.16■□□□□ 0.02
NFKB1-201ENST00000226574 LOC102724428A0A0B4J2F2 783 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 FLOT1O75955 427 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 KRT5P13647 590 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 KIF11P52732 1056 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 SIK1P57059 783 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 NFRKBQ6P4R8 1299 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
NFKB1-201ENST00000226574 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
NFKB1-201ENST00000226574 EIF3CLB5ME19 914 aaKnown RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 CLIC2O15247 247 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 CYP2C19P33261 490 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 IGDCC4Q8TDY8 1250 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 EIF3CQ99613 913 aaKnown RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 CLTAP09496 248 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 EEF1GP26641 437 aaKnown RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 ZBED6P86452 979 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 NNTQ13423 1086 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 REXO1L1PQ8IX06 675 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 DISC1Q9NRI5 854 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms