RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ASPRV1Q53RT3 343 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 MB21D1Q8N884 522 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 MTMR7Q9Y216 660 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 LTBP1Q14766 1721 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 KLRG2A4D1S0 409 aaPredicted RBP24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 CCNT1O60563 726 aaKnown RBP24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 PLCG1P19174 1290 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 JAKMIP3Q5VZ66 844 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 USP17L2Q6R6M4 530 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 FAM114A1Q8IWE2 563 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 GOLGA1Q92805 767 aa24.68■■□□□ 1.54
SMARCD2-201ENST00000225742 MYH8P13535 1937 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 COBLO75128 1261 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 LETM2Q2VYF4 491 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 TTI2Q6NXR4 508 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 REXO1Q8N1G1 1221 aaKnown RBP24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 ZNF507Q8TCN5 953 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 TRIM47Q96LD4 638 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 LZTFL1Q9NQ48 299 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 LRRC4BQ9NT99 713 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 MYO3BQ8WXR4 1341 aa24.67■■□□□ 1.54
SMARCD2-201ENST00000225742 ZRANB2O95218 330 aaKnown RBP eCLIP24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 CCNE1P24864 410 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 HMGB2P26583 209 aaKnown RBP24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 KRT9P35527 623 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 DNM2P50570 870 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 SLC27A3Q5K4L6 730 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 CEP112Q8N8E3 955 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 PIGSQ96S52 555 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 POLLQ9UGP5 575 aa24.66■■□□□ 1.54
SMARCD2-201ENST00000225742 ERVK-24P63145 666 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 TXNRD1Q16881 649 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 PPP1R18Q6NYC8 613 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 SP8Q8IXZ3 490 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 OR8K1Q8NGG5 319 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 CALML4Q96GE6 196 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 NUP58Q9BVL2 599 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 TRIM9Q9C026 710 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 EXOC1Q9NV70 894 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 CDC23Q9UJX2 597 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 MAPK8IP1Q9UQF2 711 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 RETREG2Q8NC44 543 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 P2RX5Q93086 422 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 CAPN11Q9UMQ6 739 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 FHOD1Q9Y613 1164 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 QSER1Q2KHR3 1735 aa24.65■■□□□ 1.54
SMARCD2-201ENST00000225742 CTAGE9A4FU28 777 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 GABPAQ06546 454 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 SRGAP1Q7Z6B7 1085 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 TBCKQ8TEA7 893 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 DNAJC7Q99615 494 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 COA1Q9GZY4 146 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 MTMR4Q9NYA4 1195 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 STK17AQ9UEE5 414 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 SWAP70Q9UH65 585 aa24.64■■□□□ 1.54
SMARCD2-201ENST00000225742 IGKV6D-41A0A0C4DH26 115 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 TRIM49BA6NDI0 452 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 USP17L5A8MUK1 530 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 SNHG28P0DPA3 235 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 PDHBP11177 359 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 FXR2P51116 673 aaKnown RBP eCLIP24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 TSR1Q2NL82 804 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 ZNF569Q5MCW4 686 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 CNNM4Q6P4Q7 775 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 CREBRFQ8IUR6 639 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 IQCDQ96DY2 449 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 LUC7L2Q9Y383 392 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 C6orf229H3BNL8 230 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 POTEB2H3BUK9 544 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 SRGNP10124 158 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 PMS1P54277 932 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 PRDM4Q9UKN5 801 aa24.63■■□□□ 1.53
SMARCD2-201ENST00000225742 PNMA6AP0CW24 399 aaPredicted RBP24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 ADCY7P51828 1080 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 PDE4DQ08499 809 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 CSGALNACT2Q8N6G5 542 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 LRRC15Q8TF66 581 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 MTMR9Q96QG7 549 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 PLIN2Q99541 437 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 DUSP9Q99956 384 aaKnown RBP24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 RAB34Q9BZG1 259 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 CPVLQ9H3G5 476 aa24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 EPN1Q9Y6I3 576 aaPredicted RBP24.62■■□□□ 1.53
SMARCD2-201ENST00000225742 RNF225M0QZC1 329 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 ASIC1P78348 528 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 TMEM266Q2M3C6 531 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 TEX35Q5T0J7 233 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 ZNF662Q6ZS27 426 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 ACRBPQ8NEB7 543 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 LRRC27Q9C0I9 530 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 VAT1LQ9HCJ6 419 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 ARHGAP25P42331 645 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 TECP42680 631 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 PDIA5Q14554 519 aa24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 NAPGQ99747 312 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 MMTAG2Q9BU76 263 aaKnown RBP24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 IRX2Q9BZI1 471 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 BIN2Q9UBW5 565 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-201ENST00000225742 PVALEFA0A1B0GWK0 134 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms