RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 ATP2A1O14983 1001 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 KIF23Q02241 960 aaPredicted RBP19.01■□□□□ 0.63
CHMP5-201ENST00000223500 GRM1Q13255 1194 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 CYP4F22Q6NT55 531 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 FERMT3Q86UX7 667 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 SMCR8Q8TEV9 937 aaPredicted RBP19.01■□□□□ 0.63
CHMP5-201ENST00000223500 AGBL1Q96MI9 1066 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 PARK7Q99497 189 aaKnown RBP19.01■□□□□ 0.63
CHMP5-201ENST00000223500 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 PSTPIP2Q9H939 334 aa19.01■□□□□ 0.63
CHMP5-201ENST00000223500 BTBD18B2RXH4 712 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 ALAS1P13196 640 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 NOGQ13253 232 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 PLS1Q14651 629 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 TMEM132BQ14DG7 1078 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 TKFCQ3LXA3 575 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 BRAPQ7Z569 592 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 FAM43AQ8N2R8 423 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 PTPN18Q99952 460 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 RIC8AQ9NPQ8 531 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 ZNF214Q9UL59 606 aaPredicted RBP19■□□□□ 0.63
CHMP5-201ENST00000223500 RABGAP1Q9Y3P9 1069 aa19■□□□□ 0.63
CHMP5-201ENST00000223500 U2AF2P26368 475 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHMP5-201ENST00000223500 STAT3P40763 770 aa18.99■□□□□ 0.63
CHMP5-201ENST00000223500 GCLCP48506 637 aaPredicted RBP18.99■□□□□ 0.63
CHMP5-201ENST00000223500 RESTQ13127 1097 aa18.99■□□□□ 0.63
CHMP5-201ENST00000223500 SNRNP48Q6IEG0 339 aaKnown RBP18.99■□□□□ 0.63
CHMP5-201ENST00000223500 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
CHMP5-201ENST00000223500 CAPNS2Q96L46 248 aa18.99■□□□□ 0.63
CHMP5-201ENST00000223500 A0A0G2JMZ2 1700 aa18.99■□□□□ 0.63
CHMP5-201ENST00000223500 NPY5RQ15761 445 aa18.98■□□□□ 0.63
CHMP5-201ENST00000223500 MCTP2Q6DN12 878 aa18.98■□□□□ 0.63
CHMP5-201ENST00000223500 MCF2L2Q86YR7 1114 aa18.98■□□□□ 0.63
CHMP5-201ENST00000223500 NOSTRINQ8IVI9 506 aa18.98■□□□□ 0.63
CHMP5-201ENST00000223500 REXO1Q8N1G1 1221 aaKnown RBP18.98■□□□□ 0.63
CHMP5-201ENST00000223500 PAGR1Q9BTK6 254 aa18.98■□□□□ 0.63
CHMP5-201ENST00000223500 CYP2C8P10632 490 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 COPB2P35606 906 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 TM4SF4P48230 202 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 IFNL1Q8IU54 200 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 SAMD3Q8N6K7 520 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 OXER1Q8TDS5 423 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 TNPO1Q92973 898 aaKnown RBP18.97■□□□□ 0.63
CHMP5-201ENST00000223500 TRERF1Q96PN7 1200 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 SPATC1LQ9H0A9 340 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 IGF2BP3O00425 579 aaKnown RBP eCLIP18.97■□□□□ 0.63
CHMP5-201ENST00000223500 TAL1P17542 331 aaPredicted RBP18.97■□□□□ 0.63
CHMP5-201ENST00000223500 NR5A1Q13285 461 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 RIOX2Q8IUF8 465 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 HOMER2Q9NSB8 354 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 RNF146Q9NTX7 359 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 BTBD7Q9P203 1132 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 RBPJLQ9UBG7 517 aa18.97■□□□□ 0.63
CHMP5-201ENST00000223500 CCDC194A0A1B0GVG4 234 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 KIF28PB7ZC32 967 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 GCOM1H8Y6P7 765 aaPredicted RBP18.96■□□□□ 0.63
CHMP5-201ENST00000223500 SLC25A27O95847 323 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 POLR2MP0CAP2 368 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 TAF1CQ15572 869 aaPredicted RBP18.96■□□□□ 0.63
CHMP5-201ENST00000223500 KRT25Q7Z3Z0 450 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 MAF1Q9H063 256 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 BIN2Q9UBW5 565 aaPredicted RBP18.96■□□□□ 0.63
CHMP5-201ENST00000223500 FBXO40Q9UH90 709 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 PCDHA6Q9UN73 950 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 PCDHA8Q9Y5H6 950 aa18.96■□□□□ 0.63
CHMP5-201ENST00000223500 MYH15Q9Y2K3 1946 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 M0R2N6 131 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 PIK3CDO00329 1044 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 CFBP00751 764 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 FOSP01100 380 aaPredicted RBP18.95■□□□□ 0.62
CHMP5-201ENST00000223500 CCNA1P78396 465 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 GPRC5AQ8NFJ5 357 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 TNFRSF25Q93038 417 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 ZNF396Q96N95 335 aaPredicted RBP18.95■□□□□ 0.62
CHMP5-201ENST00000223500 ACAD9Q9H845 621 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 MAP3K20Q9NYL2 800 aaKnown RBP18.95■□□□□ 0.62
CHMP5-201ENST00000223500 NOL7Q9UMY1 257 aaKnown RBP18.95■□□□□ 0.62
CHMP5-201ENST00000223500 TCHHQ07283 1943 aa18.95■□□□□ 0.62
CHMP5-201ENST00000223500 CNMDO75829 334 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 ALDH1A1P00352 501 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 CLK2P49760 499 aaKnown RBP18.94■□□□□ 0.62
CHMP5-201ENST00000223500 ERVK-9P63128 1117 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 ERVK-24P63145 666 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 UBE2SQ16763 222 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 FOXD4L6Q3SYB3 417 aaPredicted RBP18.94■□□□□ 0.62
CHMP5-201ENST00000223500 MYSM1Q5VVJ2 828 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 JAKMIP3Q5VZ66 844 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 ATL3Q6DD88 541 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 POTEEQ6S8J3 1075 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 FOXD4L3Q6VB84 417 aaPredicted RBP18.94■□□□□ 0.62
CHMP5-201ENST00000223500 RASGRP4Q8TDF6 673 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 CLEC4DQ8WXI8 215 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 GBP4Q96PP9 640 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 ZFYVE28Q9HCC9 887 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 RIPK3Q9Y572 518 aa18.94■□□□□ 0.62
CHMP5-201ENST00000223500 RBBP6Q7Z6E9 1792 aaKnown RBP18.94■□□□□ 0.62
CHMP5-201ENST00000223500 SPDYE3A6NKU9 549 aa18.93■□□□□ 0.62
CHMP5-201ENST00000223500 MEIS2O14770 477 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms