RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 U2AF1L4Q8WU68 220 aaKnown RBP14.78□□□□□ -0.04
LSM5-201ENST00000223084 BRCA2P51587 3418 aa14.77□□□□□ -0.04
LSM5-201ENST00000223084 MCM3APO60318 1980 aa14.77□□□□□ -0.04
LSM5-201ENST00000223084 NFIBO00712 420 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 SGPL1O95470 568 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 LIFRP42702 1097 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 CNTN2Q02246 1040 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 NSMFQ6X4W1 530 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 CCDC144CPQ8IYA2 1237 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 TMTC2Q8N394 836 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 CLEC4DQ8WXI8 215 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 FGD4Q96M96 766 aa14.77□□□□□ -0.05
LSM5-201ENST00000223084 DIS3Q9Y2L1 958 aaKnown RBP14.77□□□□□ -0.05
LSM5-201ENST00000223084 WDR19Q8NEZ3 1342 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 CYTH3O43739 400 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 DDAH1O94760 285 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 TFRCP02786 760 aaKnown RBP14.76□□□□□ -0.05
LSM5-201ENST00000223084 CYBAP13498 195 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 CNGA1P29973 690 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 PURBQ96QR8 312 aaKnown RBP14.76□□□□□ -0.05
LSM5-201ENST00000223084 CYP39A1Q9NYL5 469 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 SLC12A7Q9Y666 1083 aa14.76□□□□□ -0.05
LSM5-201ENST00000223084 SOWAHBA6NEL2 793 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 EPB41L2O43491 1005 aaKnown RBP14.75□□□□□ -0.05
LSM5-201ENST00000223084 PPP1R11O60927 126 aaPredicted RBP14.75□□□□□ -0.05
LSM5-201ENST00000223084 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
LSM5-201ENST00000223084 BAATQ14032 418 aaPredicted RBP14.75□□□□□ -0.05
LSM5-201ENST00000223084 BLOC1S2Q6QNY1 142 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 FBXO11Q86XK2 927 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 HOMER1Q86YM7 354 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
LSM5-201ENST00000223084 MTMR8Q96EF0 704 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 PIGSQ96S52 555 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 TINF2Q9BSI4 451 aa14.75□□□□□ -0.05
LSM5-201ENST00000223084 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
LSM5-201ENST00000223084 LCTP09848 1927 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 PFASO15067 1338 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 PTPDC1A2A3K4 754 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 PLEKHA8P1O95397 391 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 SEC24BO95487 1268 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 SNAI1O95863 264 aaPredicted RBP14.74□□□□□ -0.05
LSM5-201ENST00000223084 CASTP20810 708 aaKnown RBP14.74□□□□□ -0.05
LSM5-201ENST00000223084 ANO1Q5XXA6 986 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 SLC30A10Q6XR72 485 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 Q6ZUG5 572 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 SGMS1Q86VZ5 419 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 MICU3Q86XE3 530 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 CMTR1Q8N1G2 835 aaKnown RBP14.74□□□□□ -0.05
LSM5-201ENST00000223084 TBC1D5Q92609 795 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 MAP3K14Q99558 947 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 CRISPLD2Q9H0B8 497 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 RIOX1Q9H6W3 641 aa14.74□□□□□ -0.05
LSM5-201ENST00000223084 ASTN1O14525 1302 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 ZBTB5O15062 677 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 CALM1P0DP23 149 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 CALM2P0DP24 149 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 CALM3P0DP25 149 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 CALML3P27482 149 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 KIF5BP33176 963 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 FGD1P98174 961 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 LHX8Q68G74 356 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 APOA5Q6Q788 366 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 ZNF467Q7Z7K2 595 aaPredicted RBP14.73□□□□□ -0.05
LSM5-201ENST00000223084 SRBD1Q8N5C6 995 aaKnown RBP14.73□□□□□ -0.05
LSM5-201ENST00000223084 PNMA2Q9UL42 364 aa14.73□□□□□ -0.05
LSM5-201ENST00000223084 ABCB11O95342 1321 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 KLF18A0A0U1RQI7 1052 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 ZNF865P0CJ78 1059 aaPredicted RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 PSMA5P28066 241 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 RPS6P62753 249 aaKnown RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 APOBRQ0VD83 1088 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 MAMDC4Q6UXC1 1216 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 SYNE3Q6ZMZ3 975 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 ARMCX2Q7L311 632 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 CCDC82Q8N4S0 544 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 FANCBQ8NB91 859 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 DIS3LQ8TF46 1054 aaKnown RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 BRF1Q92994 677 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 AMNQ9BXJ7 453 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 DDX20Q9UHI6 824 aaKnown RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 OGDHLQ9ULD0 1010 aa14.72□□□□□ -0.05
LSM5-201ENST00000223084 NAP1L2Q9ULW6 460 aaPredicted RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 MKI67P46013 3256 aaKnown RBP14.72□□□□□ -0.05
LSM5-201ENST00000223084 SYNGAP1Q96PV0 1343 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 PNMA6FA0A0J9YX94 578 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 SEPT4O43236 478 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 ZBTB43O43298 467 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 FARP2O94887 1054 aaPredicted RBP14.71□□□□□ -0.05
LSM5-201ENST00000223084 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
LSM5-201ENST00000223084 MSL3Q8N5Y2 521 aaKnown RBP14.71□□□□□ -0.05
LSM5-201ENST00000223084 SPZ1Q9BXG8 430 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 UPF3BQ9BZI7 483 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms