RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 HOOK2Q96ED9 719 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 FBXO2Q9UK22 296 aaPredicted RBP17.25■□□□□ 0.35
PAF1-201ENST00000221265 PCDHA1Q9Y5I3 950 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 KINO60870 393 aaKnown RBP17.25■□□□□ 0.35
PAF1-201ENST00000221265 TPM3P06753 285 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 MCM7P33993 719 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 SPP2Q13103 211 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 USH1GQ495M9 461 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
PAF1-201ENST00000221265 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
PAF1-201ENST00000221265 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 FMR1NBQ8N0W7 255 aaPredicted RBP17.25■□□□□ 0.35
PAF1-201ENST00000221265 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
PAF1-201ENST00000221265 ZNF75DP51815 510 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 IQCB1Q15051 598 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
PAF1-201ENST00000221265 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 RIC8AQ9NPQ8 531 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 GINM1Q9NU53 330 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 ZC3H4Q9UPT8 1303 aaKnown RBP17.24■□□□□ 0.35
PAF1-201ENST00000221265 PAPPA2Q9BXP8 1791 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 GOLGA6L6A8MZA4 724 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 PTGDRQ13258 359 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 STX1AQ16623 288 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 PPP1R18Q6NYC8 613 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
PAF1-201ENST00000221265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.35
PAF1-201ENST00000221265 TAF1DQ9H5J8 278 aaPredicted RBP17.24■□□□□ 0.35
PAF1-201ENST00000221265 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 EMILIN3Q9NT22 766 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 SPTLC3Q9NUV7 552 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
PAF1-201ENST00000221265 PARP14Q460N5 1801 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 PTPREP23469 700 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 CMA1P23946 247 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 TRAPPC10P48553 1259 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 PYCARDQ9ULZ3 195 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
PAF1-201ENST00000221265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L15C9J2P7 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L13C9JLJ4 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L11C9JVI0 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L18D6R9N7 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L22D6RA61 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L17D6RBQ6 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L19D6RCP7 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L20D6RJB6 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 CUTAO60888 179 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 PFKFB1P16118 471 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L24Q0WX57 530 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.22■□□□□ 0.35
PAF1-201ENST00000221265 KRT25Q7Z3Z0 450 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 AMNQ9BXJ7 453 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 PSTPIP2Q9H939 334 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 A0A087WWV3 80 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 VCAM1P19320 739 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 NONOQ15233 471 aaKnown RBP eCLIP17.22■□□□□ 0.35
PAF1-201ENST00000221265 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 CCDC174Q6PII3 467 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 USP49Q70CQ1 688 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 MOB2Q70IA6 237 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 KIAA1524Q8TCG1 905 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 CHURC1Q8WUH1 139 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 CUL5Q93034 780 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 WDR18Q9BV38 432 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 SRPRBQ9Y5M8 271 aaKnown RBP17.22■□□□□ 0.35
PAF1-201ENST00000221265 PTPRFP10586 1907 aa17.22■□□□□ 0.35
PAF1-201ENST00000221265 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 OPLAHO14841 1288 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 EDIL3O43854 480 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 PTGS1P23219 599 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 CLK2P49760 499 aaKnown RBP17.21■□□□□ 0.35
PAF1-201ENST00000221265 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
PAF1-201ENST00000221265 VGLL4Q14135 290 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 C4orf32Q8N8J7 132 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 CDCA5Q96FF9 252 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 FEM1BQ9UK73 627 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 RLFQ13129 1914 aa17.21■□□□□ 0.35
PAF1-201ENST00000221265 BACE1P56817 501 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 IL17AQ16552 155 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 LPAR1Q92633 364 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 ERCC4Q92889 916 aaPredicted RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 P2RX7Q99572 595 aaKnown RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 TMEM60Q9H2L4 133 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 RANBP17Q9H2T7 1088 aaKnown RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 SNCAIPQ9Y6H5 919 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 PLA2G6O60733 806 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms