RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ABCC6O95255 1503 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 EIF2AK2P19525 551 aaKnown RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 KIF23Q02241 960 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 HERC4Q5GLZ8 1057 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 PNMA8AQ86V59 439 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 SGMS1Q86VZ5 419 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 AOPEPQ8N6M6 819 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 DCAF4Q8WV16 495 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 PSMD1Q99460 953 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 LRP6O75581 1613 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 MMP1P03956 469 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 LUZP1Q86V48 1076 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 PRPF38AQ8NAV1 312 aaKnown RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 HOXC10Q9NYD6 342 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 ZBTB5O15062 677 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 MTMR2Q13614 643 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 TTBK2Q6IQ55 1244 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 MIER3Q7Z3K6 550 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 PAF1Q8N7H5 531 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 SLF1Q9BQI6 1058 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 GOLGA6L10A0A0M3HER8 536 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 EXOSC10Q01780 885 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 SYT17Q9BSW7 474 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USO1O60763 962 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 DKC1O60832 514 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 NDUFB10O96000 172 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 ADALQ6DHV7 355 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 USP17L6PQ6QN14 398 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 CCDC186Q7Z3E2 898 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 ANKRD62A6NC57 917 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 EPHX2P34913 555 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 GNG11P61952 73 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 GRIK5Q16478 980 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 IGDCC4Q8TDY8 1250 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 ADARB2Q9NS39 739 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 MRVI1Q9Y6F6 885 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 HARSP12081 509 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 SKILP12757 684 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 WDR19Q8NEZ3 1342 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 LMO7Q8WWI1 1683 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 DDTLA6NHG4 134 aaPredicted RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 MYCP01106 439 aaPredicted RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 VEGFAP15692 232 aaPredicted RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 GBP2P32456 591 aaPredicted RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
CCDC113-201ENST00000219299 FAM114A1Q8IWE2 563 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 NLGN2Q8NFZ4 835 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 SPC25Q9HBM1 224 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 PCDHA7Q9UN72 937 aa10.49□□□□□ -0.73
CCDC113-201ENST00000219299 WNT10BO00744 389 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 CDC25AP30304 524 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 SMC1AQ14683 1233 aaKnown RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 SEPT14Q6ZU15 432 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 TBC1D7Q9P0N9 293 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 CCDC175P0C221 793 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 MAP3K9P80192 1104 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 MAP1SQ66K74 1059 aaPredicted RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 ZKSCAN4Q969J2 545 aaPredicted RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 NAA15Q9BXJ9 866 aaKnown RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 LMBRD1Q9NUN5 540 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 HUNKP57058 714 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 GRM4Q14833 912 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 NBPF12Q5TAG4 269 aaPredicted RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 KIF2CQ99661 725 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 TTC12Q9H892 705 aaPredicted RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 KRT13P13646 458 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 PFKFB1P16118 471 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 UBASH3AP57075 661 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 ANTXR2P58335 489 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 IFFO1Q0D2I5 559 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 TDRD12Q587J7 1177 aaKnown RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 LRCH2Q5VUJ6 765 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 ADGRF4Q8IZF3 695 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 BLZF1Q9H2G9 400 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
CCDC113-201ENST00000219299 SERTAD1Q9UHV2 236 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 FEM1BQ9UK73 627 aa10.48□□□□□ -0.73
CCDC113-201ENST00000219299 CETN2P41208 172 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms