RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CFBP00751 764 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CETN1Q12798 172 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 SEC23AQ15436 765 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 NYAP1Q6ZVC0 841 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 GPBP1Q86WP2 473 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 TSGA10Q9BZW7 698 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 JCADQ9P266 1359 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 FAM170AA1A519 330 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CYP27A1Q02318 531 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 IFT81Q8WYA0 676 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CUEDC2Q9H467 287 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 DBNDD1Q9H9R9 158 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 ZBTB21Q9ULJ3 1066 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 DNM3Q9UQ16 869 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 TTLL1O95922 423 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CCNE1P24864 410 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CERKLQ49MI3 558 aaPredicted RBP13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
TM9SF4-201ENST00000217315 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 GRM4Q14833 912 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 DNAJC21Q5F1R6 531 aaKnown RBP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 PARD6BQ9BYG5 372 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 SH3GLB2Q9NR46 395 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 NDUFA10O95299 355 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 TRAF1Q13077 416 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 BARHL2Q9NY43 387 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 ADGRG1Q9Y653 693 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 ALDH1B1P30837 517 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 CACNB3P54284 484 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 MAATS1Q7Z4T9 603 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 TC2NQ8N9U0 490 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 PANK4Q9NVE7 773 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 TMEM260Q9NX78 707 aa13.72□□□□□ -0.21
TM9SF4-201ENST00000217315 RPL13P26373 211 aaKnown RBP13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 GPSM2P81274 684 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 BRD3Q15059 726 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 EARS2Q5JPH6 523 aaKnown RBP13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 POTEMA6NI47 508 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 ICA1Q05084 483 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 DPYDQ12882 1025 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 SPICE1Q8N0Z3 855 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 MAGEF1Q9HAY2 307 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 ABHD10Q9NUJ1 306 aa13.71□□□□□ -0.21
TM9SF4-201ENST00000217315 SPATA31A5Q5VU36 1347 aa13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 SPATA31A7Q8IWB4 1347 aa13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 IFI16Q16666 785 aaKnown RBP13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 MAEAQ7L5Y9 396 aa13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 MB21D1Q8N884 522 aa13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 KIF1AQ12756 1690 aa13.71□□□□□ -0.22
TM9SF4-201ENST00000217315 A0A1B0GTH6 734 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 FAM196BA6NMK8 535 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 ANKRD7Q92527 254 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 H0YIN7 160 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 HSF2BPO75031 334 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 PNMA6AP0CW24 399 aaPredicted RBP13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 SSR1P43307 286 aaKnown RBP13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 FXR1P51114 621 aaKnown RBP eCLIP13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 VAV2P52735 878 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 GCNT3O95395 438 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 MYL1P05976 194 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 NR1I3Q14994 352 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 PKN1Q16512 942 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 LONRF2Q1L5Z9 754 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 TMEM60Q9H2L4 133 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 MRPL44Q9H9J2 332 aaKnown RBP13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
TM9SF4-201ENST00000217315 TTC26A0AVF1 554 aa13.69□□□□□ -0.22
TM9SF4-201ENST00000217315 BUB1O43683 1085 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms