RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 DPYDQ12882 1025 aa21.07■□□□□ 0.96
CTSA-201ENST00000191018 MRFAP1L1Q96HT8 127 aa21.07■□□□□ 0.96
CTSA-201ENST00000191018 CCSER1Q9C0I3 900 aa21.07■□□□□ 0.96
CTSA-201ENST00000191018 SMC2O95347 1197 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 MSNP26038 577 aaKnown RBP21.06■□□□□ 0.96
CTSA-201ENST00000191018 TXLNAP40222 546 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 TNNI2P48788 182 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 UBE2SQ16763 222 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 SYDE2Q5VT97 1194 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 AK8Q96MA6 479 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 PSTPIP2Q9H939 334 aa21.06■□□□□ 0.96
CTSA-201ENST00000191018 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.06■□□□□ 0.96
CTSA-201ENST00000191018 TMEM232C9JQI7 657 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 AFMP43652 599 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 MIGA2Q7L4E1 593 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 MLKLQ8NB16 471 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 TEPSINQ96N21 525 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 HSD3B7Q9H2F3 369 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 PCDHA1Q9Y5I3 950 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 GOLGA6L6A8MZA4 724 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 CDC25AP30304 524 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 GMPSP49915 693 aaPredicted RBP21.05■□□□□ 0.96
CTSA-201ENST00000191018 MYL5Q02045 173 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 RASA3Q14644 834 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 KIAA1755Q5JYT7 1200 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 GSDMAQ96QA5 445 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 MTMR9Q96QG7 549 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 DISC1Q9NRI5 854 aa21.05■□□□□ 0.96
CTSA-201ENST00000191018 TNFAIP1Q13829 316 aa21.04■□□□□ 0.96
CTSA-201ENST00000191018 PPP4R3AQ6IN85 833 aa21.04■□□□□ 0.96
CTSA-201ENST00000191018 MICALL2Q8IY33 904 aa21.04■□□□□ 0.96
CTSA-201ENST00000191018 SPC24Q8NBT2 197 aa21.04■□□□□ 0.96
CTSA-201ENST00000191018 MTRQ99707 1265 aa21.04■□□□□ 0.96
CTSA-201ENST00000191018 AMNQ9BXJ7 453 aa21.04■□□□□ 0.96
CTSA-201ENST00000191018 DICER1Q9UPY3 1922 aaKnown RBP21.03■□□□□ 0.96
CTSA-201ENST00000191018 PP2D1A8MPX8 630 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 TPM3P06753 285 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 NAALADL2Q58DX5 795 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 GOPCQ9HD26 462 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 TPM4P67936 248 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 KARSQ15046 597 aaKnown RBP21.03■□□□□ 0.96
CTSA-201ENST00000191018 SPICE1Q8N0Z3 855 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 DACH1Q9UI36 760 aa21.03■□□□□ 0.96
CTSA-201ENST00000191018 PHF20L1A8MW92 1017 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 SLC37A4O43826 429 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 ZNF500O60304 480 aaPredicted RBP21.02■□□□□ 0.96
CTSA-201ENST00000191018 TDP2O95551 362 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 CASP1P29466 404 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 UBA7P41226 1012 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 STAT2P52630 851 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 FBXO11Q86XK2 927 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 IGSF22Q8N9C0 903 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 CNOT7Q9UIV1 285 aaKnown RBP21.02■□□□□ 0.96
CTSA-201ENST00000191018 PRR12Q9ULL5 1215 aa21.02■□□□□ 0.96
CTSA-201ENST00000191018 MEIS2O14770 477 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 GTPBP6O43824 516 aaPredicted RBP21.01■□□□□ 0.95
CTSA-201ENST00000191018 ASNSP08243 561 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 STAT6P42226 847 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 CT47A1Q5JQC4 288 aaPredicted RBP21.01■□□□□ 0.95
CTSA-201ENST00000191018 SAMD7Q7Z3H4 446 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 VCPKMTQ9H867 229 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 IKQ13123 557 aaPredicted RBP21.01■□□□□ 0.95
CTSA-201ENST00000191018 CALCRLQ16602 461 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 ZNF830Q96NB3 372 aaPredicted RBP21.01■□□□□ 0.95
CTSA-201ENST00000191018 SH2D4AQ9H788 454 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 TTC12Q9H892 705 aaPredicted RBP21.01■□□□□ 0.95
CTSA-201ENST00000191018 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.01■□□□□ 0.95
CTSA-201ENST00000191018 GJA3Q9Y6H8 435 aa21.01■□□□□ 0.95
CTSA-201ENST00000191018 USP17L15C9J2P7 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L13C9JLJ4 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L11C9JVI0 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L18D6R9N7 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L22D6RA61 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L17D6RBQ6 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L19D6RCP7 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L20D6RJB6 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 PLA2G6O60733 806 aa21■□□□□ 0.95
CTSA-201ENST00000191018 GCFC2P16383 781 aaKnown RBP21■□□□□ 0.95
CTSA-201ENST00000191018 FXR2P51116 673 aaKnown RBP eCLIP21■□□□□ 0.95
CTSA-201ENST00000191018 SNAP25P60880 206 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L24Q0WX57 530 aa21■□□□□ 0.95
CTSA-201ENST00000191018 AP3B2Q13367 1082 aa21■□□□□ 0.95
CTSA-201ENST00000191018 RRAGBQ5VZM2 374 aa21■□□□□ 0.95
CTSA-201ENST00000191018 USP17L6PQ6QN14 398 aa21■□□□□ 0.95
CTSA-201ENST00000191018 STAMQ92783 540 aa21■□□□□ 0.95
CTSA-201ENST00000191018 SCAF8Q9UPN6 1271 aaKnown RBP21■□□□□ 0.95
CTSA-201ENST00000191018 ZNF541Q9H0D2 1346 aa21■□□□□ 0.95
CTSA-201ENST00000191018 LMOD1P29536 600 aaPredicted RBP20.99■□□□□ 0.95
CTSA-201ENST00000191018 TECP42680 631 aa20.99■□□□□ 0.95
CTSA-201ENST00000191018 FAM83BQ5T0W9 1011 aa20.99■□□□□ 0.95
CTSA-201ENST00000191018 MCTP2Q6DN12 878 aa20.99■□□□□ 0.95
CTSA-201ENST00000191018 CABP7Q86V35 215 aa20.99■□□□□ 0.95
CTSA-201ENST00000191018 ENOX1Q8TC92 643 aaKnown RBP20.99■□□□□ 0.95
CTSA-201ENST00000191018 NAP1L4Q99733 375 aaKnown RBP20.99■□□□□ 0.95
CTSA-201ENST00000191018 KCNF1Q9H3M0 494 aa20.99■□□□□ 0.95
CTSA-201ENST00000191018 CUEDC2Q9H467 287 aa20.99■□□□□ 0.95
CTSA-201ENST00000191018 ERCC5P28715 1186 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms