RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 LRCH2Q5VUJ6 765 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 MGARPQ8TDB4 240 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 RABGAP1Q9Y3P9 1069 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
MBD3-201ENST00000156825 GBP6Q6ZN66 633 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 GNA14O95837 355 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 RBM6P78332 1123 aaKnown RBP20.73■□□□□ 0.91
MBD3-201ENST00000156825 ATP7BP35670 1465 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 MECOMQ03112 1051 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 PAK2Q13177 524 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 DPY19L2Q6NUT2 758 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 SYCE1Q8N0S2 351 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 PI4K2BQ8TCG2 481 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 BCL2L12Q9HB09 334 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 TTLL1O95922 423 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 IGKV5-2P06315 115 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 LONP1P36776 959 aaKnown RBP20.72■□□□□ 0.91
MBD3-201ENST00000156825 TBC1D8O95759 1140 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 POLGP54098 1239 aaPredicted RBP20.72■□□□□ 0.91
MBD3-201ENST00000156825 DPH5Q9H2P9 285 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 ODF2LQ9ULJ1 636 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 ATF5Q9Y2D1 282 aaPredicted RBP20.72■□□□□ 0.91
MBD3-201ENST00000156825 EEPD1Q7L9B9 569 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 CNOT6LQ96LI5 555 aaKnown RBP20.72■□□□□ 0.91
MBD3-201ENST00000156825 MCAMP43121 646 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 VPS37BQ9H9H4 285 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 GCC2Q8IWJ2 1684 aa20.72■□□□□ 0.91
MBD3-201ENST00000156825 PCDHA4Q9UN74 947 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 ABL1P00519 1130 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 TUBB2AQ13885 445 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 UBE2SQ16763 222 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 DCPSQ96C86 337 aaKnown RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 TUBB2BQ9BVA1 445 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 ENC1O14682 589 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 COPB1P53618 953 aaKnown RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 POMGNT1Q8WZA1 660 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 LARP4BQ92615 738 aaKnown RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 TUBGCP2Q9BSJ2 902 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 APOL6Q9BWW8 343 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 NUCKS1Q9H1E3 243 aaKnown RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 ATF7P17544 494 aaPredicted RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 OAS2P29728 719 aaKnown RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 ITIH3Q06033 890 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 CCDC89Q8N998 374 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 IWS1Q96ST2 819 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 FOXP1Q9H334 677 aaPredicted RBP20.71■□□□□ 0.91
MBD3-201ENST00000156825 FAM184BQ9ULE4 1060 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 MYO5CQ9NQX4 1742 aa20.71■□□□□ 0.91
MBD3-201ENST00000156825 ZBTB8OSQ8IWT0 167 aa20.7■□□□□ 0.91
MBD3-201ENST00000156825 CTAGE3PQ8IX95 158 aa20.7■□□□□ 0.91
MBD3-201ENST00000156825 CPVLQ9H3G5 476 aa20.7■□□□□ 0.91
MBD3-201ENST00000156825 PCDHB6Q9Y5E3 794 aa20.7■□□□□ 0.91
MBD3-201ENST00000156825 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 SH2B2O14492 632 aaPredicted RBP20.7■□□□□ 0.9
MBD3-201ENST00000156825 SPOUT1Q5T280 376 aaKnown RBP20.7■□□□□ 0.9
MBD3-201ENST00000156825 GALNT17Q6IS24 598 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 C1orf112Q9NSG2 853 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 KRIT1O00522 736 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 CLIC2O15247 247 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 TRIML1Q8N9V2 468 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.7■□□□□ 0.9
MBD3-201ENST00000156825 BBOX1O75936 387 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 ALDH3A1P30838 453 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 ETF1P62495 437 aaKnown RBP20.7■□□□□ 0.9
MBD3-201ENST00000156825 GPATCH4Q5T3I0 446 aaKnown RBP20.7■□□□□ 0.9
MBD3-201ENST00000156825 KRT27Q7Z3Y8 459 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 ANKRD42Q8N9B4 389 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 LINC00301Q8NCQ3 95 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 CCDC17Q96LX7 622 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 MAN1A1P33908 653 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 BRINP3Q76B58 766 aa20.7■□□□□ 0.9
MBD3-201ENST00000156825 EPN1Q9Y6I3 576 aaPredicted RBP20.7■□□□□ 0.9
MBD3-201ENST00000156825 HNRNPDLO14979 420 aaKnown RBP20.69■□□□□ 0.9
MBD3-201ENST00000156825 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 TRIM58Q8NG06 486 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 CCDC51Q96ER9 411 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 SYNJ2BP-COX16A0A087WUM0 186 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 A0A1W2PQ27 194 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 A0A1W2PQ64 194 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 A0A1W2PQD8 194 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 NR2F2P24468 414 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 GABPAQ06546 454 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 Q3C1V9 767 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 COX16Q9P0S2 106 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 KDM5CP41229 1560 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 DMP1Q13316 513 aaPredicted RBP20.69■□□□□ 0.9
MBD3-201ENST00000156825 ZNF577Q9BSK1 485 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 SETD1BQ9UPS6 1966 aaKnown RBP20.69■□□□□ 0.9
MBD3-201ENST00000156825 ATP5DP30049 168 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 RASSF7Q02833 373 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 EPSTI1Q96J88 318 aa20.69■□□□□ 0.9
MBD3-201ENST00000156825 STK10O94804 968 aaKnown RBP20.68■□□□□ 0.9
MBD3-201ENST00000156825 CYP2D6P10635 497 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 EHHADHQ08426 723 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 SEPT14Q6ZU15 432 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 CCDC110Q8TBZ0 833 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 MRFAP1L1Q96HT8 127 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 SEPT9Q9UHD8 586 aaPredicted RBP20.68■□□□□ 0.9
MBD3-201ENST00000156825 EXOC3L4Q17RC7 722 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms