RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 DOCK2Q92608 1830 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 CCDC151A5D8V7 595 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 KLRC4O43908 158 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 IPO7O95373 1038 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 ATP1A1P05023 1023 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 MATR3P43243 847 aaKnown RBP eCLIP9.28□□□□□ -0.925e-11■□□□□ 9.1
CDC27-201ENST00000066544 LRRC41Q15345 812 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 GSPT2Q8IYD1 628 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 SPATA31A5Q5VU36 1347 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 SPATA31A7Q8IWB4 1347 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 LRRC10BA6NIK2 292 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 LGALS16A8MUM7 142 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 PLEKP08567 350 aaPredicted RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 OR52Z1P0C646 297 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 FAM193AP78312 1265 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 NOC4LQ9BVI4 516 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 GNAQP50148 359 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 RAD51AP2Q09MP3 1159 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 NONOQ15233 471 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDC27-201ENST00000066544 POTEDQ86YR6 584 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 KANSL2Q9H9L4 492 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 BARHL2Q9NY43 387 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 SEC63Q9UGP8 760 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 C6orf229H3BNL8 230 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 ZNF185O15231 689 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 MARCH6O60337 910 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 CYP2C19P33261 490 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 TNNI2P48788 182 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 CDK8P49336 464 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 WDR66Q8TBY9 1149 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 CEP95Q96GE4 821 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
CDC27-201ENST00000066544 ZNHIT6Q9NWK9 470 aaKnown RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.28□□□□□ -0.92
CDC27-201ENST00000066544 RCCD1A6NED2 376 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 USP17L5A8MUK1 530 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 RIMBP2O15034 1052 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 CT47A1Q5JQC4 288 aaPredicted RBP9.27□□□□□ -0.92
CDC27-201ENST00000066544 SLC10A5Q5PT55 438 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 WDR59Q6PJI9 974 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 DUSP9Q99956 384 aaKnown RBP9.27□□□□□ -0.92
CDC27-201ENST00000066544 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.92
CDC27-201ENST00000066544 PLEKHA4Q9H4M7 779 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 JADE2Q9NQC1 790 aa9.27□□□□□ -0.92
CDC27-201ENST00000066544 POTEMA6NI47 508 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 TM4SF1P30408 202 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
CDC27-201ENST00000066544 MMS19Q96T76 1030 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 TRIM9Q9C026 710 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 ITIH6Q6UXX5 1313 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 BCORQ6W2J9 1755 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 RPS6KA4O75676 772 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.93
CDC27-201ENST00000066544 TTI2Q6NXR4 508 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 JAKMIP2Q96AA8 810 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 CDK5RAP3Q96JB5 506 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 TBC1D7Q9P0N9 293 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 HERVK_113P62684 666 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 MFSD14BQ5SR56 506 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 P2RX5Q93086 422 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 ADAM21Q9UKJ8 722 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 ERLIN1O75477 346 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 TDP2O95551 362 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 BRD3Q15059 726 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 CNBD1Q8NA66 436 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 GLIS3Q8NEA6 775 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 C6orf50Q9HD87 102 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 FAN1Q9Y2M0 1017 aa9.27□□□□□ -0.93
CDC27-201ENST00000066544 FAM170AA1A519 330 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 CCDC96Q2M329 555 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 NEK8Q86SG6 692 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 GIMAP8Q8ND71 665 aaPredicted RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 RRP36Q96EU6 259 aaKnown RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 REXO1Q8N1G1 1221 aaKnown RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 RPGRQ92834 1020 aaKnown RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 ZHX3Q9H4I2 956 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 MKRN1Q9UHC7 482 aaKnown RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 THRAP3Q9Y2W1 955 aaKnown RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 PALM3A6NDB9 673 aaPredicted RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 DNM2P50570 870 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 CACNB1Q02641 598 aaPredicted RBP9.26□□□□□ -0.93
CDC27-201ENST00000066544 UBE2SQ16763 222 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 SMARCAL1Q9NZC9 954 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 LRWD1Q9UFC0 647 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 SLC16A2P36021 539 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 TRIM14Q14142 442 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 DEF6Q9H4E7 631 aa9.26□□□□□ -0.93
CDC27-201ENST00000066544 EPHB6O15197 1021 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 RHOBTB3O94955 611 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 LDHCP07864 332 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CCNE1P24864 410 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 EEF1GP26641 437 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms