RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ATL3Q6DD88 541 aa12.01□□□□□ -0.49
CD4-201ENST00000011653 GADL1Q6ZQY3 521 aa12.01□□□□□ -0.49
CD4-201ENST00000011653 ZNF396Q96N95 335 aaPredicted RBP12.01□□□□□ -0.49
CD4-201ENST00000011653 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
CD4-201ENST00000011653 NRBP1Q9UHY1 535 aa12.01□□□□□ -0.49
CD4-201ENST00000011653 KRT2P35908 639 aa12□□□□□ -0.49
CD4-201ENST00000011653 IREB2P48200 963 aaKnown RBP12□□□□□ -0.49
CD4-201ENST00000011653 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
CD4-201ENST00000011653 SYDE2Q5VT97 1194 aa12□□□□□ -0.49
CD4-201ENST00000011653 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
CD4-201ENST00000011653 CCAR1Q8IX12 1150 aaKnown RBP12□□□□□ -0.49
CD4-201ENST00000011653 ZNF280CQ8ND82 737 aa12□□□□□ -0.49
CD4-201ENST00000011653 RCOR1Q9UKL0 485 aa12□□□□□ -0.49
CD4-201ENST00000011653 PCDHA1Q9Y5I3 950 aa12□□□□□ -0.49
CD4-201ENST00000011653 STK36Q9NRP7 1315 aa12□□□□□ -0.49
CD4-201ENST00000011653 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
CD4-201ENST00000011653 ME1P48163 572 aa12□□□□□ -0.49
CD4-201ENST00000011653 STK38Q15208 465 aa12□□□□□ -0.49
CD4-201ENST00000011653 MYSM1Q5VVJ2 828 aa12□□□□□ -0.49
CD4-201ENST00000011653 DCAF4Q8WV16 495 aa12□□□□□ -0.49
CD4-201ENST00000011653 SH2D4AQ9H788 454 aa12□□□□□ -0.49
CD4-201ENST00000011653 TMEM260Q9NX78 707 aa12□□□□□ -0.49
CD4-201ENST00000011653 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
CD4-201ENST00000011653 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
CD4-201ENST00000011653 KINO60870 393 aaKnown RBP12□□□□□ -0.49
CD4-201ENST00000011653 PPP1R11O60927 126 aaPredicted RBP12□□□□□ -0.49
CD4-201ENST00000011653 SNHG28P0DPA3 235 aa12□□□□□ -0.49
CD4-201ENST00000011653 PLS1Q14651 629 aa12□□□□□ -0.49
CD4-201ENST00000011653 SARM1Q6SZW1 724 aa12□□□□□ -0.49
CD4-201ENST00000011653 PDCL2Q8N4E4 241 aa12□□□□□ -0.49
CD4-201ENST00000011653 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
CD4-201ENST00000011653 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
CD4-201ENST00000011653 RPAP3Q9H6T3 665 aaPredicted RBP12□□□□□ -0.49
CD4-201ENST00000011653 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 IRF6O14896 467 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 VCAM1P19320 739 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 NOVP48745 357 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 NT5C2P49902 561 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 USP17L6PQ6QN14 398 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
CD4-201ENST00000011653 C16orf45Q96MC5 204 aaPredicted RBP11.99□□□□□ -0.49
CD4-201ENST00000011653 PITPNM2Q9BZ72 1349 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 SSC5DA1L4H1 1573 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 MYH6P13533 1939 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 BECN2A8MW95 431 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 CTIFO43310 598 aaKnown RBP11.99□□□□□ -0.49
CD4-201ENST00000011653 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 ZNF174Q15697 407 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 NOSTRINQ8IVI9 506 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 ZC3H15Q8WU90 426 aaKnown RBP11.99□□□□□ -0.49
CD4-201ENST00000011653 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 SNCAIPQ9Y6H5 919 aa11.99□□□□□ -0.49
CD4-201ENST00000011653 CCDC194A0A1B0GVG4 234 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 STXBP3O00186 592 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 ZBTB5O15062 677 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 HOXA13P31271 388 aaPredicted RBP11.98□□□□□ -0.49
CD4-201ENST00000011653 BACE1P56817 501 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 IQCB1Q15051 598 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 INF2Q27J81 1249 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 SPECC1Q5M775 1068 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 BLIDQ8IZY5 108 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 AS3MTQ9HBK9 375 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
CD4-201ENST00000011653 BARHL2Q9NY43 387 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 COL2A1P02458 1487 aaPredicted RBP11.98□□□□□ -0.49
CD4-201ENST00000011653 NEMFO60524 1076 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 TNNT1P13805 278 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 C11orf57Q6ZUT1 292 aaPredicted RBP11.98□□□□□ -0.49
CD4-201ENST00000011653 ARMC9Q7Z3E5 817 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 FCHSD1Q86WN1 690 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 WNK4Q96J92 1243 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 MAP3K14Q99558 947 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 PHF20Q9BVI0 1012 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 ANO10Q9NW15 660 aa11.98□□□□□ -0.49
CD4-201ENST00000011653 PNMA6FA0A0J9YX94 578 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 WNT7AO00755 349 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 MCM7P33993 719 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 FAM160A1Q05DH4 1040 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 TPD52L1Q16890 204 aaPredicted RBP11.97□□□□□ -0.49
CD4-201ENST00000011653 FAM43BQ6ZT52 329 aaPredicted RBP11.97□□□□□ -0.49
CD4-201ENST00000011653 FBXO11Q86XK2 927 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 CACTINQ8WUQ7 758 aaKnown RBP11.97□□□□□ -0.49
CD4-201ENST00000011653 ANKRD7Q92527 254 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 RAVER2Q9HCJ3 691 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms