RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 LdhbP16125 334 aaKnown RBP10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Lrrc36Q3V0M2 755 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Sp4Q62445 782 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 B4galnt4Q766D5 1034 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Otud6bQ8K2H2 294 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Syce1Q9D495 329 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Calcoco2A2A6M5 331 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Map7d1A2AJI0 846 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ccdc191J3QQ27 883 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Vmn2r71L7N2D8 855 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Haus2Q9CQS9 234 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ccdc105Q9D4K7 499 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 SetQ9EQU5 289 aaKnown RBP10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Peak1Q69Z38 1735 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tom1l2Q5SRX1 507 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Fkbp3Q62446 224 aaKnown RBP10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 ErfeQ6PGN1 340 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tmem87aQ8BXN9 555 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ccz1Q8C1Y8 480 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Apol10aQ8CCA5 318 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mmtag2Q99LX5 260 aaKnown RBP10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Dydc1Q9D9T0 175 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Sertad1Q9JL10 236 aa10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 OatP29758 439 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Rasa2P58069 847 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tsg101Q61187 391 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Lmbrd1Q8K0B2 537 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ddx27Q921N6 760 aaKnown RBP10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Knop1Q9Z2Q2 478 aaKnown RBP10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 FosP01101 380 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 CtshP49935 333 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pcif1P59114 706 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Frat1P70339 274 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Sfi1Q3UZY0 1216 aaKnown RBP10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Igbp1Q61249 340 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ube2oQ6ZPJ3 1288 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Jade2Q6ZQF7 829 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 E2f4Q8R0K9 410 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Saal1Q9D2C2 474 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mtmr9Q9Z2D0 545 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 GsdmeQ9Z2D3 512 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 CluhQ5SW19 1315 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ccdc6D3YZP9 469 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ugt1a6bK9J7B2 531 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 D1Pas1P16381 660 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ugt1a6Q64435 531 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ugt1a7cQ6ZQM8 531 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Cyp4f39Q8BGU0 532 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Frmd3Q8BHD4 595 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pcdha7Q91Y13 937 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Zfp853A0A1D5RM95 733 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Cdk4P30285 303 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Traf1P39428 409 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Psmc2P46471 433 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 LdhdQ7TNG8 484 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ptrh1Q8BW00 204 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Znrd1-asQ8R0E5 213 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Gpsm2Q8VDU0 679 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mtfr1lQ9CWE0 289 aa10.68□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Herc3A6H6S0 1050 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pcdha4O88689 947 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 MycnP03966 462 aaKnown RBP10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Kifap3P70188 793 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Cyp2e1Q05421 493 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pnma5Q5DTT8 618 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Insm1Q63ZV0 521 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Trub2Q91WG3 331 aaKnown RBP10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Thap2Q9D305 217 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Col5a2Q3U962 1497 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Armc3A2AU72 881 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pagr1bF6V0H0 108 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Trap1aP19473 224 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Anks1aP59672 1150 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Cdc37Q61081 379 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Sdccag8Q80UF4 717 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Kbtbd13Q8C828 458 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Slc18a1Q8R090 521 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pagr1aQ99L02 253 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Slc5a5Q99PN0 618 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 ArcQ9WV31 396 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Nup188Q6ZQH8 1759 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ccdc121E9Q6D3 323 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Esr2O08537 530 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mcm6P97311 821 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Acot10Q32MW3 439 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Taf3Q5HZG4 932 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Slc9c1Q6UJY2 1175 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Necab1Q8BG18 352 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Fam161bQ8CB59 589 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Phldb2Q8K1N2 1249 aa10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mrpl11Q9CQF0 192 aaKnown RBP10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Pdcd6ipQ9WU78 869 aaKnown RBP10.67□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Gcom1E9PZ54 550 aa10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Abcb4P21440 1276 aa10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tgfb2P27090 414 aa10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Cdc25aP48964 514 aa10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Hmgb1P63158 215 aaKnown RBP10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Map9Q3TRR0 646 aa10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 MyzapQ3UIJ9 466 aa10.66□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 D630036H23RikQ3UQD6 204 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms