RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Camsap3Q80VC9 1252 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 CnstQ8CBC4 711 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Msantd4Q91YU3 345 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ppp1r7Q3UM45 361 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ccdc85aQ5SP85 500 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Unc5clQ6R653 518 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Spata21Q8BHW6 681 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pdzd4Q9QY39 772 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Spag7Q7TNE3 227 aaKnown RBP17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ints5Q8CHT3 1018 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Fam133bQ9CVI2 245 aaKnown RBP17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Abcb6Q9DC29 842 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Arhgef10lA2AWP8 1280 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Sept11Q8C1B7 431 aaKnown RBP17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 BaatQ91X34 420 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 IcoslgQ9JHJ8 322 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Surf6P70279 355 aaKnown RBP17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Actr5Q80US4 605 aaKnown RBP17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Klhl40Q9D783 621 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Serpinb12Q9D7P9 423 aa17.55■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ugt1a5B2RT14 529 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Dnm2P39054 870 aaKnown RBP17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 GopcQ8BH60 463 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Serpinb13Q8CDC0 389 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Zfp597E9Q6S0 419 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Tnni3P48787 211 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Clic6Q8BHB9 596 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Morc4Q8BMD7 928 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 IarsQ8BU30 1262 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Bola3Q8CEI1 110 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Lonp1Q8CGK3 949 aaKnown RBP17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 1700020D05RikQ99PB1 294 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Aox2Q5SGK3 1345 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 1700113H08RikE9Q9Q5 327 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Lipo1J3QME6 396 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Usp53P15975 1069 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Armcx3Q8BHS6 379 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Tmco4Q91WU4 631 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Taf4bG5E8Z2 855 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Magea1O89006 320 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Magea5O89009 320 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Fam207aP58468 219 aaKnown RBP17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ubn1Q4G0F8 1135 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 ErmnQ5EBJ4 281 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Cnnm4Q69ZF7 771 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Wdr44Q6NVE8 915 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Senp6Q6P7W0 1132 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pramel6Q810Y9 485 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ireb2Q811J3 963 aaKnown RBP17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Slfnl1Q8BHW9 410 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 HscbQ8K3A0 234 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pus3Q9JI38 481 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Clic4Q9QYB1 253 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Magea2Q9R2A2 320 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm15262A0A140LIQ5 728 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Cyp3a57D3YYZ0 503 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm6121L7MUF1 212 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pkp1P97350 728 aaKnown RBP17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm5168Q4KL04 211 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Swap70Q6A028 585 aaKnown RBP17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Atad2Q8CDM1 1040 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Appl2Q8K3G9 662 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Slfn1Q9Z0I7 337 aa17.54■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm11985A0A1B0GS61 206 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gimd1E9PW74 217 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Sept1P42209 366 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pik3caP42337 1068 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ttll4Q80UG8 1193 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Tmem87aQ8BXN9 555 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Rps6ka2Q9WUT3 733 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Prex1Q69ZK0 1650 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 LdhdQ7TNG8 484 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 SyncQ9EPM5 470 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Foxp1P58462 705 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Trim80Q3V061 624 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 HarsQ61035 509 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Sptlc3Q8BG54 563 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Rab11fip4Q8BQP8 635 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Tfap4Q9JIZ5 338 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Med23Q80YQ2 1367 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm28043E0CXC2 719 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ankrd13cQ3UX43 541 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Rps6ka5Q8C050 863 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Efcab8Q8C9R9 203 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Lrit1Q8K099 624 aa17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Riok3Q9DBU3 519 aaKnown RBP17.53■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm20425E9Q035 978 aaKnown RBP17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gja8P28236 440 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 SrprbP47758 269 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ahcyl2Q68FL4 613 aaKnown RBP17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Iws1Q8C1D8 766 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Rbm42Q91V81 474 aaKnown RBP17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Dnajc17Q91WT4 303 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Neurl4Q5NCX5 1563 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 DohhA0A1Y7VJ29 135 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm5169Q5M8P2 212 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Crybg3Q80W49 1005 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Saal1Q9D2C2 474 aa17.52■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Tlr8P58682 1032 aa17.52■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Mier3Q3UHF3 551 aa17.52■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms