RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Ubn2Q80WC1 1314 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ephb4P54761 987 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Atp8b1Q148W0 1251 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Kctd16Q5DTY9 427 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Creb3Q61817 404 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Sp4Q62445 782 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ptcd1Q8C2E4 695 aaKnown RBP12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Uap1Q91YN5 522 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Dnaaf5B9EJR8 853 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 E2f6O54917 272 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Drp2Q05AA6 957 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Gprasp2Q8BUY8 826 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ufl1Q8CCJ3 793 aaKnown RBP12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Snx30Q8CE50 437 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Cbwd1Q8VEH6 393 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Khdc3Q9CWU5 440 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Gdpd2Q9ESM6 539 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Irs4Q9Z0Y7 1216 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Tlk2O55047 718 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ckap2Q3V1H1 664 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Tmcc1Q69ZZ6 649 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Mtss1lQ6P9S0 715 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Psmd2Q8VDM4 908 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 PudpQ9D5U5 234 aa12.19□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Pja1O55176 578 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Acot10Q32MW3 439 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Dab2ipQ3UHC7 1189 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Fkbp3Q62446 224 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Zbtb7bQ64321 544 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Nme8Q715T0 586 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ipo5Q8BKC5 1097 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Lrrd1Q8C0R9 853 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Aldh1l2Q8K009 923 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Fermt3Q8K1B8 665 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ssfa2Q922B9 1252 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 4931423N10RikQ9D4J9 382 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Atp11aP98197 1187 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 HarsQ61035 509 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Foxd1Q61345 456 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Csgalnact2Q8C1F4 542 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Apol10aQ8CCA5 318 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 ParvbQ9ES46 365 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Gm29094F6Q785 221 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Snrpa1P57784 255 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Upf3bQ3ULL6 472 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ppp1r1bQ60829 194 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Trim56Q80VI1 734 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Bola2Q8BGS2 86 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 L3mbtl3Q8BLB7 883 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Riox2Q8CD15 465 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Swi5Q8K3D3 89 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Rpn1Q91YQ5 608 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Zfp644E9QA22 1323 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Sh3tc1G3X9F6 1346 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Maml3D4QGC2 1135 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Calb1P12658 261 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Tac1P41539 130 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Gabpb1Q00420 383 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Haus6Q6NV99 933 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Fbxo9Q8BK06 437 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Mrps9Q9D7N3 390 aaKnown RBP12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Cib4Q9D9N5 185 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Aldh18a1Q9Z110 795 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Aox4Q3TYQ9 1336 aa12.18□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Mup5P11591 180 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Atp8a2P98200 1148 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 PcQ05920 1178 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Runx1t1Q61909 577 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Slc12a6Q924N4 1150 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Sgk1Q9WVC6 431 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ncapd3Q6ZQK0 1506 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 JrklB2RRL2 523 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ifit3bE9PV48 403 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Taf1bP97358 586 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Cab39Q06138 341 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Zscan2Q07230 614 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Kcnk9Q3LS21 402 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Rnf10Q3UIW5 804 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ccdc85bQ6PDY0 202 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ccdc169Q8BXX9 214 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Adprhl2Q8CG72 370 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Wdr47Q8CGF6 920 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Rab14Q91V41 215 aaKnown RBP12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 IdeQ9JHR7 1019 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Lrrc6O88978 473 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Tnfaip2Q61333 691 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Ddx5Q61656 614 aaKnown RBP12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Krt87Q6IMF0 495 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Mettl24Q8CCB5 363 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Tmed10Q9D1D4 219 aaKnown RBP12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Atp5dQ9D3D9 168 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Vti1aO89116 217 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 IvlP48997 467 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Zfp956Q3UZY6 572 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Kdm4cQ8VCD7 1054 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Galnt15Q9D2N8 638 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Cpsf3Q9QXK7 684 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Bub1bQ9Z1S0 1052 aa12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Smarca4Q3TKT4 1613 aaKnown RBP12.17□□□□□ -0.46
Rtn3-202ENSMUST00000065304 Dthd1E9PZX1 795 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms