RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C SIF2P38262 535 aa9.54□□□□□ -0.88
SSN3YPL042C SEC31P38968 1273 aaKnown RBP9.54□□□□□ -0.88
SSN3YPL042C YER137CP40083 148 aaKnown RBP9.54□□□□□ -0.88
SSN3YPL042C LTP1P40347 161 aa9.54□□□□□ -0.88
SSN3YPL042C YJR079WP47126 109 aa9.54□□□□□ -0.88
SSN3YPL042C RFX1P48743 811 aa9.54□□□□□ -0.88
SSN3YPL042C KTR6P54070 446 aa9.54□□□□□ -0.88
SSN3YPL042C EGD1Q02642 157 aaKnown RBP9.54□□□□□ -0.88
SSN3YPL042C SHR3Q02774 210 aa9.54□□□□□ -0.88
SSN3YPL042C RLI1Q03195 608 aaKnown RBP9.54□□□□□ -0.88
SSN3YPL042C EMI2Q04409 500 aaKnown RBP9.54□□□□□ -0.88
SSN3YPL042C AIM32Q04689 311 aa9.54□□□□□ -0.88
SSN3YPL042C OMS1Q06668 471 aa9.54□□□□□ -0.88
SSN3YPL042C AAD4Q07747 329 aa9.54□□□□□ -0.88
SSN3YPL042C YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
SSN3YPL042C YOR223WQ12015 292 aa9.54□□□□□ -0.88
SSN3YPL042C HOS1Q12214 470 aa9.54□□□□□ -0.88
SSN3YPL042C ISA2Q12425 185 aa9.54□□□□□ -0.88
SSN3YPL042C NCP1P16603 691 aaKnown RBP9.53□□□□□ -0.88
SSN3YPL042C DAL81P21657 970 aa9.53□□□□□ -0.88
SSN3YPL042C DSS4P32601 143 aa9.53□□□□□ -0.88
SSN3YPL042C DIA4P38705 446 aaPredicted RBP9.53□□□□□ -0.88
SSN3YPL042C AIM18P38884 321 aa9.53□□□□□ -0.88
SSN3YPL042C THO1P40040 218 aaKnown RBP9.53□□□□□ -0.88
SSN3YPL042C VPS25P47142 202 aa9.53□□□□□ -0.88
SSN3YPL042C YGR012WP53206 393 aa9.53□□□□□ -0.88
SSN3YPL042C BSC5P53755 489 aa9.53□□□□□ -0.88
SSN3YPL042C CAF120P53836 1060 aa9.53□□□□□ -0.88
SSN3YPL042C FYV6P53913 173 aa9.53□□□□□ -0.88
SSN3YPL042C ECM18Q04623 453 aa9.53□□□□□ -0.88
SSN3YPL042C YLR345WQ06137 509 aa9.53□□□□□ -0.88
SSN3YPL042C DCS1Q06151 350 aa9.53□□□□□ -0.88
SSN3YPL042C OPI10Q08202 246 aa9.53□□□□□ -0.88
SSN3YPL042C YLL056CQ12177 298 aa9.53□□□□□ -0.88
SSN3YPL042C CCP1P00431 361 aa9.52□□□□□ -0.89
SSN3YPL042C PAB1P04147 577 aaKnown RBP RIP-Chip data9.52□□□□□ -0.89not detected
SSN3YPL042C HIP1P06775 603 aa9.52□□□□□ -0.89
SSN3YPL042C MET3P08536 511 aa9.52□□□□□ -0.89
SSN3YPL042C ILV6P25605 309 aaKnown RBP9.52□□□□□ -0.89
SSN3YPL042C COQ8P27697 501 aa9.52□□□□□ -0.89
SSN3YPL042C APM3P38153 483 aa9.52□□□□□ -0.89
SSN3YPL042C IFA38P38286 347 aa9.52□□□□□ -0.89
SSN3YPL042C YHL012WP38709 493 aa9.52□□□□□ -0.89
SSN3YPL042C CKB2P38930 258 aa9.52□□□□□ -0.89
SSN3YPL042C MET13P53128 600 aa9.52□□□□□ -0.89
SSN3YPL042C UGO1Q03327 502 aa9.52□□□□□ -0.89
SSN3YPL042C RVB1Q03940 463 aaKnown RBP9.52□□□□□ -0.89
SSN3YPL042C YMR027WQ04371 470 aa9.52□□□□□ -0.89
SSN3YPL042C SPG3Q04398 127 aaPredicted RBP9.52□□□□□ -0.89
SSN3YPL042C ISR1Q06098 443 aaKnown RBP9.52□□□□□ -0.89
SSN3YPL042C RPP2BP02400 110 aaKnown RBP9.51□□□□□ -0.89
SSN3YPL042C CMD1P06787 147 aaKnown RBP9.51□□□□□ -0.89
SSN3YPL042C MAS1P10507 462 aa9.51□□□□□ -0.89
SSN3YPL042C SEC62P21825 274 aa9.51□□□□□ -0.89
SSN3YPL042C CPR5P35176 225 aa9.51□□□□□ -0.89
SSN3YPL042C RRT5P43607 289 aa9.51□□□□□ -0.89
SSN3YPL042C CIK1Q01649 594 aa9.51□□□□□ -0.89
SSN3YPL042C MTD1Q02046 320 aaKnown RBP9.51□□□□□ -0.89
SSN3YPL042C USA1Q03714 838 aa9.51□□□□□ -0.89
SSN3YPL042C DYN3Q04949 312 aa9.51□□□□□ -0.89
SSN3YPL042C ARP7Q12406 477 aa9.51□□□□□ -0.89
SSN3YPL042C SEC63P14906 663 aa9.51□□□□□ -0.89
SSN3YPL042C CWH43P25618 953 aa9.51□□□□□ -0.89
SSN3YPL042C RPT5P33297 434 aaKnown RBP9.51□□□□□ -0.89
SSN3YPL042C NTC20P38302 140 aaPredicted RBP9.51□□□□□ -0.89
SSN3YPL042C MSC7P38694 644 aa9.51□□□□□ -0.89
SSN3YPL042C RIO2P40160 425 aaKnown RBP9.51□□□□□ -0.89
SSN3YPL042C VHR1P40522 640 aa9.51□□□□□ -0.89
SSN3YPL042C NMA111P53920 997 aa9.51□□□□□ -0.89
SSN3YPL042C ABZ2Q03266 374 aa9.51□□□□□ -0.89
SSN3YPL042C URC2Q04411 772 aa9.51□□□□□ -0.89
SSN3YPL042C BSC2Q05611 235 aa9.51□□□□□ -0.89
SSN3YPL042C ECM22Q05958 814 aaPredicted RBP9.51□□□□□ -0.89
SSN3YPL042C SAM3Q08986 587 aa9.51□□□□□ -0.89
SSN3YPL042C MMP1Q12372 583 aa9.51□□□□□ -0.89
SSN3YPL042C RPS9AO13516 197 aaKnown RBP9.5□□□□□ -0.89
SSN3YPL042C IMA3P0CW40 589 aa9.5□□□□□ -0.89
SSN3YPL042C IMA4P0CW41 589 aa9.5□□□□□ -0.89
SSN3YPL042C YIH1P25637 258 aa9.5□□□□□ -0.89
SSN3YPL042C RAD5P32849 1169 aaPredicted RBP9.5□□□□□ -0.89
SSN3YPL042C TSA1P34760 196 aaKnown RBP9.5□□□□□ -0.89
SSN3YPL042C OAF3P36023 863 aa9.5□□□□□ -0.89
SSN3YPL042C SEA4P38164 1038 aa9.5□□□□□ -0.89
SSN3YPL042C FSH1P38777 243 aaKnown RBP9.5□□□□□ -0.89
SSN3YPL042C GIP4P39732 760 aa9.5□□□□□ -0.89
SSN3YPL042C SCC4P40090 624 aa9.5□□□□□ -0.89
SSN3YPL042C MMF1P40185 145 aaKnown RBP9.5□□□□□ -0.89
SSN3YPL042C MNN11P46985 422 aaKnown RBP9.5□□□□□ -0.89
SSN3YPL042C RMR1P53060 241 aa9.5□□□□□ -0.89
SSN3YPL042C YPL071CQ02864 156 aa9.5□□□□□ -0.89
SSN3YPL042C IMA2Q08295 589 aa9.5□□□□□ -0.89
SSN3YPL042C GPM3Q12326 303 aa9.5□□□□□ -0.89
SSN3YPL042C CDC36P06100 191 aaPredicted RBP9.49□□□□□ -0.89
SSN3YPL042C RDS2P19541 446 aaKnown RBP9.49□□□□□ -0.89
SSN3YPL042C YKR051WP36142 418 aa9.49□□□□□ -0.89
SSN3YPL042C MCM7P38132 845 aa9.49□□□□□ -0.89
SSN3YPL042C SOH1P38633 127 aa9.49□□□□□ -0.89
SSN3YPL042C VMA22P38784 181 aa9.49□□□□□ -0.89
SSN3YPL042C ATF1P40353 525 aa9.49□□□□□ -0.89
SSN3YPL042C AIM14P53109 570 aa9.49□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms