RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	TUL1	P36096	758 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	GMH1	P36125	273 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	SLM4	P38247	162 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	MUP3	P38734	546 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	TIF4631	P39935	952 aa	Known RBP	4.73	□□□□□ -1.65
BDP1	YNL039W	SAP1	P39955	897 aa	Known RBP	4.73	□□□□□ -1.65
BDP1	YNL039W	FET5	P43561	622 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	YFR020W	P43600	232 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	COQ6	P53318	479 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	YNL144C	P53907	740 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	ADA2	Q02336	434 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	GFD1	Q04839	188 aa	Known RBP	4.73	□□□□□ -1.65
BDP1	YNL039W	CDA2	Q06703	312 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	UAF30	Q08747	228 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	PSY3	Q12318	242 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	ZPS1	Q12512	249 aa		4.73	□□□□□ -1.65
BDP1	YNL039W	HIP1	P06775	603 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	SPE2	P21182	396 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	YEL043W	P32618	956 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	PCL7	P40186	285 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	SMC3	P47037	1230 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	AAT1	Q01802	451 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	RAD33	Q04231	177 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	AIM39	Q08223	395 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	FRE3	Q08905	711 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	APL4	Q12028	832 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	VPS54	Q12071	889 aa		4.72	□□□□□ -1.65
BDP1	YNL039W	PRP6	P19735	899 aa	Predicted RBP	4.71	□□□□□ -1.66
BDP1	YNL039W	GAS1	P22146	559 aa	Known RBP	4.71	□□□□□ -1.66
BDP1	YNL039W	PPH22	P23595	377 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	MRPL9	P31334	269 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	YBL055C	P34220	418 aa	Predicted RBP	4.71	□□□□□ -1.66
BDP1	YNL039W	PIM1	P36775	1133 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	ADH5	P38113	351 aa	Known RBP	4.71	□□□□□ -1.66
BDP1	YNL039W	PPS1	P38148	807 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	YSW1	P38280	609 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	MSR1	P38714	643 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	NDC80	P40460	691 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	PTR3	P43606	678 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	YGR149W	P48236	432 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	MLC1	P53141	149 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	SMX3	P54999	86 aa	Predicted RBP	4.71	□□□□□ -1.66
BDP1	YNL039W	RTT109	Q07794	436 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	YLR040C	Q07988	224 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	ETT1	Q08421	412 aa	Known RBP	4.71	□□□□□ -1.66
BDP1	YNL039W	NTO1	Q12311	748 aa		4.71	□□□□□ -1.66
BDP1	YNL039W	RPL6B	P05739	176 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	PET111	P08468	800 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	LPD1	P09624	499 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	HRR25	P29295	494 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	NUP133	P36161	1157 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	OMA1	P36163	345 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	ADE17	P38009	592 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	NTC20	P38302	140 aa	Predicted RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	CCT7	P42943	550 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	NET1	P47035	1189 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	URB2	P47108	1174 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	YGL138C	P53122	345 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	SKO1	Q02100	647 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	RPL6A	Q02326	176 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	WAR1	Q03631	944 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	TAP42	Q04372	366 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	RRP45	Q05636	305 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	DBP9	Q06218	594 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	RLP24	Q07915	199 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	RPC40	P07703	335 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	BOS1	P25385	244 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	ICS2	P38284	255 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	GDT1	P38301	280 aa	Predicted RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	CBR1	P38626	284 aa	Known RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	WSS1	P38838	269 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	STU2	P46675	888 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	FMS1	P50264	508 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	ALT2	P52892	507 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	CAF130	P53280	1122 aa	Predicted RBP	4.7	□□□□□ -1.66
BDP1	YNL039W	ACL4	Q03771	387 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	MGR3	Q04472	501 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	HRD3	Q05787	833 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	PCL8	Q08966	492 aa		4.7	□□□□□ -1.66
BDP1	YNL039W	INO80	P53115	1489 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	PTC6	P25646	442 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	SUL1	P38359	859 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	COS5	P47187	383 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	PHO23	P50947	330 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	YNR068C	P53754	272 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	COS7	Q07788	383 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	PML1	Q07930	204 aa	Predicted RBP	4.69	□□□□□ -1.66
BDP1	YNL039W	MLH2	Q07980	695 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	YOL159C	Q08300	171 aa		4.69	□□□□□ -1.66
BDP1	YNL039W	LEA1	Q08963	238 aa	Predicted RBP	4.69	□□□□□ -1.66
BDP1	YNL039W	AHA1	Q12449	350 aa	Known RBP	4.69	□□□□□ -1.66
BDP1	YNL039W	ILV2	P07342	687 aa	Known RBP	4.68	□□□□□ -1.66
BDP1	YNL039W	RPL31B	P0C2H9	113 aa	Known RBP	4.68	□□□□□ -1.66
BDP1	YNL039W	DAP2	P18962	818 aa		4.68	□□□□□ -1.66
BDP1	YNL039W	SUI2	P20459	304 aa	Known RBP	4.68	□□□□□ -1.66
BDP1	YNL039W	GLG1	P36143	616 aa		4.68	□□□□□ -1.66
BDP1	YNL039W	TSC10	P38342	320 aa		4.68	□□□□□ -1.66
BDP1	YNL039W	SER3	P40054	469 aa		4.68	□□□□□ -1.66
BDP1	YNL039W	PRP43	P53131	767 aa	Known RBP	4.68	□□□□□ -1.66
BDP1	YNL039W	HST1	P53685	503 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms