RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	CDC31	P06704	161 aa	Known RBP	5.95	□□□□□ -1.46
SIR2	YDL042C	CBS1	P14066	229 aa		5.95	□□□□□ -1.46
SIR2	YDL042C	KRS1	P15180	591 aa	Known RBP	5.95	□□□□□ -1.46
SIR2	YDL042C	CLB2	P24869	491 aa		5.95	□□□□□ -1.46
SIR2	YDL042C	BNA3	P47039	444 aa	Known RBP	5.95	□□□□□ -1.46
SIR2	YDL042C	MAK10	Q02197	733 aa		5.95	□□□□□ -1.46
SIR2	YDL042C	VTC3	Q02725	835 aa		5.95	□□□□□ -1.46
SIR2	YDL042C	YEH1	Q07804	573 aa		5.95	□□□□□ -1.46
SIR2	YDL042C	LEU9	Q12166	604 aa	Known RBP	5.95	□□□□□ -1.46
SIR2	YDL042C	MLP2	P40457	1679 aa		5.95	□□□□□ -1.46
SIR2	YDL042C	JNM1	P36224	373 aa		5.94	□□□□□ -1.46
SIR2	YDL042C	FLO5	P38894	1075 aa		5.94	□□□□□ -1.46
SIR2	YDL042C	RGI2	P40188	164 aa		5.94	□□□□□ -1.46
SIR2	YDL042C	IRC8	P47046	822 aa		5.94	□□□□□ -1.46
SIR2	YDL042C	RPT6	Q01939	405 aa	Known RBP	5.94	□□□□□ -1.46
SIR2	YDL042C	LUC7	Q07508	261 aa	Predicted RBP	5.94	□□□□□ -1.46
SIR2	YDL042C	YPT6	Q99260	215 aa		5.94	□□□□□ -1.46
SIR2	YDL042C	PDR15	Q04182	1529 aa	Known RBP	5.94	□□□□□ -1.46
SIR2	YDL042C	PTP1	P25044	335 aa		5.94	□□□□□ -1.46
SIR2	YDL042C	DPB4	Q04603	196 aa	Known RBP	5.94	□□□□□ -1.46
SIR2	YDL042C	MMS1	Q06211	1407 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	GDB1	Q06625	1536 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	MDM10	P18409	493 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	REG2	P38232	338 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	TOM71	P38825	639 aa	Known RBP	5.93	□□□□□ -1.46
SIR2	YDL042C	CCT6	P39079	546 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	RMD8	P43620	662 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	VPS25	P47142	202 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	SGM1	P47166	707 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	YPT11	P48559	417 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	EFM6	P53970	246 aa		5.93	□□□□□ -1.46
SIR2	YDL042C	FMP40	Q08968	688 aa	Predicted RBP	5.93	□□□□□ -1.46
SIR2	YDL042C	MF(ALPHA)1	P01149	165 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	KGD1	P20967	1014 aa	Known RBP	5.92	□□□□□ -1.46
SIR2	YDL042C	MIA40	P36046	403 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	TSC10	P38342	320 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	RFC1	P38630	861 aa	Known RBP	5.92	□□□□□ -1.46
SIR2	YDL042C	IRC6	P43615	237 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	SRB7	P47822	140 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	MRPL19	P53875	158 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	YJR112W-A	Q3E743	109 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	NUP170	P38181	1502 aa		5.92	□□□□□ -1.46
SIR2	YDL042C	SSE2	P32590	693 aa	Known RBP	5.91	□□□□□ -1.46
SIR2	YDL042C	SCO2	P38072	301 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	ANS1	P38832	159 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	ARF3	P40994	183 aa	RIP-Chip data	5.91	□□□□□ -1.46	not detected
SIR2	YDL042C	FAR3	P46671	204 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	NET1	P47035	1189 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	YGR127W	P53275	312 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	CAC2	Q04199	468 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	EMI2	Q04409	500 aa	Known RBP	5.91	□□□□□ -1.46
SIR2	YDL042C	EST1	P17214	699 aa	Predicted RBP	5.91	□□□□□ -1.46
SIR2	YDL042C	OCA4	P25366	362 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	PGS1	P25578	521 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	SRO77	P38163	1010 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	DBP8	P38719	431 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	PTR3	P43606	678 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	LYS20	P48570	428 aa	Known RBP	5.91	□□□□□ -1.46
SIR2	YDL042C	YGR066C	P53242	292 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	RTT109	Q07794	436 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	BUD7	Q08754	746 aa		5.91	□□□□□ -1.46
SIR2	YDL042C	SYN8	P31377	255 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	YBR144C	P34215	104 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	SPO22	P40511	975 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	VID30	P53076	958 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	ERG26	P53199	349 aa	Known RBP	5.9	□□□□□ -1.47
SIR2	YDL042C	STP1	Q00947	519 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	GRC3	Q07845	632 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	TEN1	Q07921	160 aa		5.9	□□□□□ -1.47
SIR2	YDL042C	ARG3	P05150	338 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	YER190C-B	P0CX94	160 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	YEL077W-A	P0CX95	160 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	YGR296C-B	P0CX96	160 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	YPL283W-B	P0CX97	160 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	YPR204C-A	P0CX98	160 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	PUP3	P25451	205 aa	Known RBP	5.89	□□□□□ -1.47
SIR2	YDL042C	VRG4	P40107	337 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	SGF73	P53165	657 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	ARP10	Q04549	284 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	ATG26	Q06321	1198 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	POS5	Q06892	414 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	ETT1	Q08421	412 aa	Known RBP	5.89	□□□□□ -1.47
SIR2	YDL042C	ATX2	Q12067	313 aa		5.89	□□□□□ -1.47
SIR2	YDL042C	IMG1	P25626	169 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	ECM32	P32644	1121 aa	Known RBP	5.88	□□□□□ -1.47
SIR2	YDL042C	STV1	P37296	890 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	HXT9	P40885	567 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	MAF1	P41910	395 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	MCP2	Q06567	569 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	IQG1	Q12280	1495 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	NUP157	P40064	1391 aa	Known RBP	5.88	□□□□□ -1.47
SIR2	YDL042C	PDR10	P51533	1564 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	ARG81	P05085	880 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	RPB8	P20436	146 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	SEF1	P34228	1148 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	UBP11	P36026	717 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	ICS2	P38284	255 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected
SIR2	YDL042C	RPS10B	P46784	105 aa	Known RBP	5.88	□□□□□ -1.47
SIR2	YDL042C	RPL15B	P54780	204 aa	Predicted RBP	5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms