RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 MYO9BQ13459 2157 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 PRKAB2O43741 272 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 DUSP11O75319 330 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 MBD4O95243 580 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 AKNAD1Q5T1N1 836 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 TMEM199Q8N511 208 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 PCSK9Q8NBP7 692 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 TEX13BQ9BXU2 312 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.41e-16■□□□□ 9.6
HNRNPU-227ENST00000640264 SPC25Q9HBM1 224 aa12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 ZHX1Q9UKY1 873 aaPredicted RBP12.56□□□□□ -0.4
HNRNPU-227ENST00000640264 CYP2D7A0A087X1C5 515 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 USP17L21D6R901 530 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 ERC2O15083 957 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 SMARCA5O60264 1052 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 C6orf222P0C671 652 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 SKOR2Q2VWA4 1001 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 TMEM240Q5SV17 173 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 SNRNP48Q6IEG0 339 aaKnown RBP12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 CCSAPQ6IQ19 270 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 C16orf86Q6ZW13 317 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 PBX4Q9BYU1 374 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 MSRAQ9UJ68 235 aa12.55□□□□□ -0.4
HNRNPU-227ENST00000640264 MUC3AQ02505 3323 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 TRAK2O60296 914 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 CSF2RAP15509 400 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 CST5P28325 142 aaPredicted RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 ADD2P35612 726 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 PBX2P40425 430 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 CDK7P50613 346 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 RASIP1Q5U651 963 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 PSRC1Q6PGN9 363 aaPredicted RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 ZNF467Q7Z7K2 595 aaPredicted RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 TNPO1Q92973 898 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 PRDM12Q9H4Q4 367 aa12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
HNRNPU-227ENST00000640264 DNAJC25-GNG10A0A024R161 153 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 MYADML2A6NDP7 307 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 GRXCR1A8MXD5 290 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 SMIM22K7EJ46 135 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ARVCFO00192 962 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ZBED4O75132 1171 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ASGR1P07306 291 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ATP5JP18859 108 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ANAPC15P60006 121 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ACVR2BQ13705 512 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 RAB30Q15771 203 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 GNASQ5JWF2 1037 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 PRPF38AQ8NAV1 312 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ABHD16BQ9H3Z7 469 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
HNRNPU-227ENST00000640264 ATP2A1O14983 1001 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 ACRP10323 421 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 MX1P20591 662 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 IGFBP4P22692 258 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 GJA9P57773 515 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 CCDC85BQ15834 202 aaPredicted RBP12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 CCDC144BQ3MJ40 725 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 CTR9Q6PD62 1173 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 FAM126BQ8IXS8 530 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 CPXCR1Q8N123 301 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 HAUS7Q99871 368 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 PPP1R12CQ9BZL4 782 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 UPF3AQ9H1J1 476 aaKnown RBP12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 RIPK3Q9Y572 518 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 MCM3APO60318 1980 aa12.52□□□□□ -0.41
HNRNPU-227ENST00000640264 MYH7P12883 1935 aa12.51□□□□□ -0.41
HNRNPU-227ENST00000640264 F5H6K3 240 aa12.51□□□□□ -0.41
HNRNPU-227ENST00000640264 ST18O60284 1047 aa12.51□□□□□ -0.41
HNRNPU-227ENST00000640264 MCM2P49736 904 aa12.51□□□□□ -0.41
HNRNPU-227ENST00000640264 NUCB2P80303 420 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms