RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TCP10L2B9ZVM9 353 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 ORC4O43929 436 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 EXOSC10Q01780 885 aaKnown RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 FAM83AQ86UY5 434 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 CCAR1Q8IX12 1150 aaKnown RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 DYNLL2Q96FJ2 89 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 TCEANC2Q96MN5 208 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 KRT23Q9C075 422 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 UBA5Q9GZZ9 404 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 DHX36Q9H2U1 1008 aaKnown RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 VEZTQ9HBM0 779 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 PDRG1Q9NUG6 133 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 DDTLA6NHG4 134 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 PRDM1O75626 825 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 MPSTP25325 297 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 MCM5P33992 734 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 HIRAP54198 1017 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 ANTXR2P58335 489 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 GABPAQ06546 454 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 PDE4BQ07343 736 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 SERINC3Q13530 473 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 RRP12Q5JTH9 1297 aaKnown RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 C16orf86Q6ZW13 317 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 FAM151AQ8WW52 585 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 EHD4Q9H223 541 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 ADARB2Q9NS39 739 aaKnown RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 TOMM22Q9NS69 142 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 PRC1O43663 620 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 CREB3O43889 395 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-220ENST00000640076 HLA-DOAP06340 250 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 AK2P54819 239 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 BECN1Q14457 450 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 CYB5R4Q7L1T6 521 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 CHST3Q7LGC8 479 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 USP48Q86UV5 1035 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 ESR2Q92731 530 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 LRRC2Q9BYS8 371 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 ALDH8A1Q9H2A2 487 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-220ENST00000640076 ZSWIM5Q9P217 1185 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 SERPINB13Q9UIV8 391 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 HACL1Q9UJ83 578 aa9.31□□□□□ -0.92
SCARB2-220ENST00000640076 SCN4AP35499 1836 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 MYH8P13535 1937 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 CDK8P49336 464 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 MCM2P49736 904 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 NT5C2P49902 561 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 TNFAIP1Q13829 316 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 TOB2Q14106 344 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 PLEKHG4Q58EX7 1191 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 HSCBQ8IWL3 235 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 FBXL16Q8N461 479 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 ALKBH8Q96BT7 664 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 CRELD1Q96HD1 420 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 AGXT2Q9BYV1 514 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 TMEM39BQ9GZU3 492 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 MKNK2Q9HBH9 465 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 ZNF287Q9HBT7 754 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 PGAP2Q9UHJ9 254 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 PRKAB1Q9Y478 270 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 POLR2AP24928 1970 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 RANBP6O60518 1105 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 GJA8P48165 433 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 RASA3Q14644 834 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 ANKRD1Q15327 319 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 ANGEL2Q5VTE6 544 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 Q6ZUG5 572 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 FOXP4Q8IVH2 680 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 CKAP2LQ8IYA6 745 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 MKL1Q969V6 931 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 RNPC3Q96LT9 517 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 IPO9Q96P70 1041 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 CSRNP1Q96S65 589 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 FAM129BQ96TA1 746 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 DNAJC18Q9H819 358 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 GGA3Q9NZ52 723 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 SWAP70Q9UH65 585 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 KCNG1Q9UIX4 513 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 SCAF8Q9UPN6 1271 aaKnown RBP9.3□□□□□ -0.92
SCARB2-220ENST00000640076 PCDHGA11Q9Y5H2 935 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 WDR90Q96KV7 1748 aa9.3□□□□□ -0.92
SCARB2-220ENST00000640076 GPR182O15218 404 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 GNA15P30679 374 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 SHMT1P34896 483 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 EPHX2P34913 555 aa9.29□□□□□ -0.92
SCARB2-220ENST00000640076 TBX4P57082 545 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms