RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 A0A1W2PQY0 241 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 ACTN4O43707 911 aaKnown RBP7.56□□□□□ -1.2
PRKCH-228ENST00000640011 GNAI2P04899 355 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-228ENST00000640011 MAP3K12Q12852 859 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 RAB30Q15771 203 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 PUS10Q3MIT2 529 aaKnown RBP7.56□□□□□ -1.2
PRKCH-228ENST00000640011 FAM47AQ5JRC9 791 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 ANO1Q5XXA6 986 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 MFSD5Q6N075 450 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 PSRC1Q6PGN9 363 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-228ENST00000640011 CCDC129Q6ZRS4 1044 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 NCAPG2Q86XI2 1143 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 TMEM199Q8N511 208 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 ANKK1Q8NFD2 765 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 ADAMTS19Q8TE59 1207 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 MAML3Q96JK9 1138 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 TANGO6Q9C0B7 1094 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 STARD7Q9NQZ5 370 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 SAP30BPQ9UHR5 308 aaKnown RBP7.56□□□□□ -1.2
PRKCH-228ENST00000640011 NOB1Q9ULX3 412 aaKnown RBP7.56□□□□□ -1.2
PRKCH-228ENST00000640011 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 ZNF236Q9UL36 1845 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 XIRP2A4UGR9 3374 aa7.56□□□□□ -1.2
PRKCH-228ENST00000640011 ELP1O95163 1332 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 TTC28Q96AY4 2481 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 COBLO75128 1261 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
PRKCH-228ENST00000640011 CYP7A1P22680 504 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 ITGB8P26012 769 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 SLFN5Q08AF3 891 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 FAAP100Q0VG06 881 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 PLS1Q14651 629 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 KCTD2Q14681 263 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 SHROOM1Q2M3G4 852 aaPredicted RBP7.55□□□□□ -1.2
PRKCH-228ENST00000640011 POTEGQ6S5H5 508 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 TMEM179Q6ZVK1 233 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 ADGRA1Q86SQ6 560 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 USP38Q8NB14 1042 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 PCSK9Q8NBP7 692 aaKnown RBP7.55□□□□□ -1.2
PRKCH-228ENST00000640011 ACER1Q8TDN7 264 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 WNT2BQ93097 391 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 GLT1D1Q96MS3 346 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 TINF2Q9BSI4 451 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 SEZ6LQ9BYH1 1024 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 PBX4Q9BYU1 374 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 SPC25Q9HBM1 224 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 ARHGEF10LQ9HCE6 1279 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 FRMPD3Q5JV73 1810 aa7.55□□□□□ -1.2
PRKCH-228ENST00000640011 GOLGA8CPA6NN73 597 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 MPHOSPH10O00566 681 aaKnown RBP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 WDR46O15213 610 aaKnown RBP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 IPO8O15397 1037 aaKnown RBP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 IDH1O75874 414 aaKnown RBP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 FLOT1O75955 427 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 PGK1P00558 417 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 ACLYP53396 1101 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 EPHB4P54760 987 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 KMT5BQ4FZB7 885 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 TNNI3KQ59H18 835 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 RASIP1Q5U651 963 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 BANK1Q8NDB2 785 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 PPM1EQ8WY54 764 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 CLUAP1Q96AJ1 413 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 MMP19Q99542 508 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 SLC28A3Q9HAS3 691 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-228ENST00000640011 SWAP70Q9UH65 585 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 FAM184BQ9ULE4 1060 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 FPGT-TNNI3KV9GXZ4 949 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 RLFQ13129 1914 aa7.54□□□□□ -1.2
PRKCH-228ENST00000640011 SYNGAP1Q96PV0 1343 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 POTEMA6NI47 508 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 ADAMTS4O75173 837 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 DUSP11O75319 330 aaKnown RBP7.53□□□□□ -1.2
PRKCH-228ENST00000640011 IGFBP4P22692 258 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 CST5P28325 142 aaPredicted RBP7.53□□□□□ -1.2
PRKCH-228ENST00000640011 SHMT1P34896 483 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 ZAP70P43403 619 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 DYNLL1P63167 89 aaKnown RBP7.53□□□□□ -1.2
PRKCH-228ENST00000640011 GABPAQ06546 454 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
PRKCH-228ENST00000640011 SEPT2Q15019 361 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 TTF1Q15361 905 aaPredicted RBP7.53□□□□□ -1.2
PRKCH-228ENST00000640011 TMEM259Q4ZIN3 620 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 TMEM240Q5SV17 173 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 PRAMEF19Q5SWL8 479 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 RIOX2Q8IUF8 465 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 HERVK_113Q902F9 699 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 PRDM12Q9H4Q4 367 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 VCPKMTQ9H867 229 aa7.53□□□□□ -1.2
PRKCH-228ENST00000640011 TSR3Q9UJK0 312 aaKnown RBP7.53□□□□□ -1.2
PRKCH-228ENST00000640011 TBX21Q9UL17 535 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms