RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KRT83P78385 493 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 STIM1Q13586 685 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 MEA1Q16626 185 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 MAGEC2Q9UBF1 373 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-204ENST00000638725 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
SNIP1-204ENST00000638725 RASSF10A6NK89 507 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 SRGNP10124 158 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 TRIM21P19474 475 aaKnown RBP12.23□□□□□ -0.45
SNIP1-204ENST00000638725 MCM3P25205 808 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 CYLC1P35663 651 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-204ENST00000638725 CYP27A1Q02318 531 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 CKAP4Q07065 602 aaKnown RBP12.23□□□□□ -0.45
SNIP1-204ENST00000638725 C2orf54Q08AI8 447 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 TTYH3Q9C0H2 523 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 TMEM60Q9H2L4 133 aa12.23□□□□□ -0.45
SNIP1-204ENST00000638725 NHEJ1Q9H9Q4 299 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-204ENST00000638725 MACROD2A1Z1Q3 448 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 TARSL2A2RTX5 802 aaKnown RBP12.22□□□□□ -0.45
SNIP1-204ENST00000638725 EIF3CLB5ME19 914 aaKnown RBP12.22□□□□□ -0.45
SNIP1-204ENST00000638725 PSMA7O14818 248 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 GGCXP38435 758 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 DNM2P50570 870 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-204ENST00000638725 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 EIF3CQ99613 913 aaKnown RBP12.22□□□□□ -0.45
SNIP1-204ENST00000638725 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 CYP2D6P10635 497 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 IDEP14735 1019 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 KCNB1Q14721 858 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 SLC4A8Q2Y0W8 1093 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 EHBP1Q8NDI1 1231 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
SNIP1-204ENST00000638725 SELENOOQ9BVL4 669 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 EXOC1Q9NV70 894 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 ABCA3Q99758 1704 aa12.22□□□□□ -0.45
SNIP1-204ENST00000638725 RHOBTB3O94955 611 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 NTSR2O95665 410 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.45
SNIP1-204ENST00000638725 TBC1D8BQ0IIM8 1120 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 TYW1BQ6NUM6 668 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 DTHD1Q6ZMT9 781 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 CSGALNACT2Q8N6G5 542 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-204ENST00000638725 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-204ENST00000638725 RPGRIP1Q96KN7 1286 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 JADE2Q9NQC1 790 aa12.21□□□□□ -0.45
SNIP1-204ENST00000638725 COL22A1Q8NFW1 1626 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-204ENST00000638725 AGPSO00116 658 aa12.21□□□□□ -0.46
SNIP1-204ENST00000638725 NKRFO15226 690 aaKnown RBP eCLIP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 IPO7O95373 1038 aaKnown RBP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 ZNF662Q6ZS27 426 aa12.21□□□□□ -0.46
SNIP1-204ENST00000638725 GIMAP8Q8ND71 665 aaPredicted RBP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 PCMTD1Q96MG8 357 aaPredicted RBP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 ZNHIT6Q9NWK9 470 aaKnown RBP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 NIP7Q9Y221 180 aaKnown RBP eCLIP12.21□□□□□ -0.46
SNIP1-204ENST00000638725 TSPY2A6NKD2 308 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 ORC4O43929 436 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 PPFIA4O75335 1185 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 CALML3P27482 149 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 UBA7P41226 1012 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 RCSD1Q6JBY9 416 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 CNOT6LQ96LI5 555 aaKnown RBP12.2□□□□□ -0.46
SNIP1-204ENST00000638725 DCP1AQ9NPI6 582 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-204ENST00000638725 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 A0A1B0GUL6 1792 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC194A0A1B0GVG4 234 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 ANO9A1A5B4 782 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 ZNF263O14978 683 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 MAGEA9P43362 315 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 ZBED6P86452 979 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 EZH2Q15910 746 aaKnown RBP12.2□□□□□ -0.46
SNIP1-204ENST00000638725 INF2Q27J81 1249 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
SNIP1-204ENST00000638725 STAG2Q8N3U4 1231 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 PURBQ96QR8 312 aaKnown RBP12.2□□□□□ -0.46
SNIP1-204ENST00000638725 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 BTG4Q9NY30 223 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
SNIP1-204ENST00000638725 A0A0G2JS52 829 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-204ENST00000638725 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
SNIP1-204ENST00000638725 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
SNIP1-204ENST00000638725 MTIF2P46199 727 aaKnown RBP12.19□□□□□ -0.46
SNIP1-204ENST00000638725 VAV2P52735 878 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 CORO7P57737 925 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 MRPS25P82663 173 aaKnown RBP12.19□□□□□ -0.46
SNIP1-204ENST00000638725 ANKRD40Q6AI12 368 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 P2RX5Q93086 422 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 NSUN4Q96CB9 384 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms