RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PTPREP23469 700 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 LMNB2Q03252 620 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 PAK2Q13177 524 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 PSMD2Q13200 908 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 MTA1Q13330 715 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 ZNF268Q14587 947 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 KCTD16Q68DU8 428 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 IFT20Q8IY31 132 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 EIF1ADQ8N9N8 165 aaKnown RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 IMPDH2P12268 514 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 THEMIS2Q5TEJ8 643 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 WHAMMQ8TF30 809 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 TMBIM4Q9HC24 238 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 GPR108Q9NPR9 543 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 BAIAP2L1Q9UHR4 511 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 SLC12A4Q9UP95 1085 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 PIK3C2AO00443 1686 aa13.33□□□□□ -0.27
CAPN3-221ENST00000638141 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 PXDNQ92626 1479 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 AHDC1Q5TGY3 1603 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 SETSIPP0DME0 302 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 TCP1P17987 556 aaKnown RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 SNX1Q13596 522 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 MEA1Q16626 185 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 CCDC181Q5TID7 509 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 KRT40Q6A162 431 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 RBM12BQ8IXT5 1001 aaKnown RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 GALNT15Q8N3T1 639 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 HDAC7Q8WUI4 952 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
CAPN3-221ENST00000638141 KCNMB3Q9NPA1 279 aa13.33□□□□□ -0.28
CAPN3-221ENST00000638141 PRC1O43663 620 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 IDEP14735 1019 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 CCND1P24385 295 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 BIRC3Q13489 604 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 TRIM29Q14134 588 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 IMMTQ16891 758 aaKnown RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 ZNF827Q17R98 1081 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 HIBCHQ6NVY1 386 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 EZH1Q92800 747 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 CHP1Q99653 195 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 PAPOLBQ9NRJ5 636 aaKnown RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 ZFATQ9P243 1243 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 NWD2Q9ULI1 1742 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 CYLC1P35663 651 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 KRT31Q15323 416 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 EZH2Q15910 746 aaKnown RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 CDC37Q16543 378 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 CMPK2Q5EBM0 449 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 TRIM74Q86UV6 250 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 TRIM73Q86UV7 250 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.32□□□□□ -0.28
CAPN3-221ENST00000638141 SERTAD1Q9UHV2 236 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 MYH13Q9UKX3 1938 aa13.32□□□□□ -0.28
CAPN3-221ENST00000638141 A0A1W2PQC6 194 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 B4DLN1 442 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 ZNF185O15231 689 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 COPB1P53618 953 aaKnown RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 SEPT2Q15019 361 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 SPATA21Q7Z572 469 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 ANKRD23Q86SG2 305 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 CCDC63Q8NA47 563 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 TBC1D31Q96DN5 1066 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 DTNBP1Q96EV8 351 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 TAF1DQ9H5J8 278 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 PLCB1Q9NQ66 1216 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 RNF14Q9UBS8 474 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 CCT8L1PA6NM43 557 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 N4BP3O15049 544 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 RNF113AO15541 343 aaKnown RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 NPTXRO95502 500 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
CAPN3-221ENST00000638141 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
CAPN3-221ENST00000638141 WASF1Q92558 559 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms