RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TMEM47Q9BQJ4 181 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 DSCC1Q9BVC3 393 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 RNF146Q9NTX7 359 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 PRKAG2Q9UGJ0 569 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 PRR12Q9ULL5 1215 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 ALAS1P13196 640 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 ATN1P54259 1190 aaPredicted RBP22.31■■□□□ 1.16
CLN6-221ENST00000637494 IMMTQ16891 758 aaKnown RBP22.31■■□□□ 1.16
CLN6-221ENST00000637494 CCDC174Q6PII3 467 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 MAMDC4Q6UXC1 1216 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 IQCA1Q86XH1 822 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 TRERF1Q96PN7 1200 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 ZHX1Q9UKY1 873 aaPredicted RBP22.31■■□□□ 1.16
CLN6-221ENST00000637494 FAM184BQ9ULE4 1060 aa22.31■■□□□ 1.16
CLN6-221ENST00000637494 POTEB2H3BUK9 544 aa22.3■■□□□ 1.16
CLN6-221ENST00000637494 LRRC41Q15345 812 aa22.3■■□□□ 1.16
CLN6-221ENST00000637494 TTC22Q5TAA0 569 aa22.3■■□□□ 1.16
CLN6-221ENST00000637494 TBC1D10CQ8IV04 446 aa22.3■■□□□ 1.16
CLN6-221ENST00000637494 RUFY2Q8WXA3 655 aa22.3■■□□□ 1.16
CLN6-221ENST00000637494 PRO3102Q9H379 93 aa22.3■■□□□ 1.16
CLN6-221ENST00000637494 ZNF865P0CJ78 1059 aaPredicted RBP22.29■■□□□ 1.16
CLN6-221ENST00000637494 TAL1P17542 331 aaPredicted RBP22.29■■□□□ 1.16
CLN6-221ENST00000637494 BMP8BP34820 402 aa22.29■■□□□ 1.16
CLN6-221ENST00000637494 GDF15Q99988 308 aa22.29■■□□□ 1.16
CLN6-221ENST00000637494 ABHD16BQ9H3Z7 469 aa22.29■■□□□ 1.16
CLN6-221ENST00000637494 PCDH10Q9P2E7 1040 aa22.29■■□□□ 1.16
CLN6-221ENST00000637494 PNMA2Q9UL42 364 aa22.29■■□□□ 1.16
CLN6-221ENST00000637494 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
CLN6-221ENST00000637494 ADCYAP1R1P41586 468 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 RTP1P59025 263 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 SYDE2Q5VT97 1194 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 GPCPD1Q9NPB8 672 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.28■■□□□ 1.16
CLN6-221ENST00000637494 ATP11BQ9Y2G3 1177 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 ZNF536O15090 1300 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 FRMPD2Q68DX3 1309 aaPredicted RBP22.28■■□□□ 1.16
CLN6-221ENST00000637494 CEP290O15078 2479 aa22.28■■□□□ 1.16
CLN6-221ENST00000637494 ASB14A6NK59 587 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 SNAI1O95863 264 aaPredicted RBP22.27■■□□□ 1.16
CLN6-221ENST00000637494 ICAM1P05362 532 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 PDE4AP27815 886 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 MAGEA10P43363 369 aaPredicted RBP22.27■■□□□ 1.16
CLN6-221ENST00000637494 SNAP25P60880 206 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 ACVR2BQ13705 512 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 SLC39A5Q6ZMH5 540 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 ARMCX2Q7L311 632 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 DGKHQ86XP1 1220 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 LBHD1Q9BQE6 289 aaPredicted RBP22.27■■□□□ 1.16
CLN6-221ENST00000637494 KRT23Q9C075 422 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 UBE2OQ9C0C9 1292 aaKnown RBP22.27■■□□□ 1.16
CLN6-221ENST00000637494 CNNM2Q9H8M5 875 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 SPC25Q9HBM1 224 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 NEDD4P46934 1319 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 RAD50Q92878 1312 aa22.27■■□□□ 1.16
CLN6-221ENST00000637494 KDM4AO75164 1064 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 PGK1P00558 417 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 PDHBP11177 359 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 SLC16A2P36021 539 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 TTBK2Q6IQ55 1244 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 RASGRP2Q7LDG7 609 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 ZKSCAN3Q9BRR0 538 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 RANBP17Q9H2T7 1088 aaKnown RBP22.26■■□□□ 1.15
CLN6-221ENST00000637494 KAT14Q9H8E8 782 aa22.26■■□□□ 1.15
CLN6-221ENST00000637494 A1CFQ9NQ94 594 aaKnown RBP22.26■■□□□ 1.15
CLN6-221ENST00000637494 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
CLN6-221ENST00000637494 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
CLN6-221ENST00000637494 CCDC144CPQ8IYA2 1237 aa22.25■■□□□ 1.15
CLN6-221ENST00000637494 PHF24Q9UPV7 400 aa22.25■■□□□ 1.15
CLN6-221ENST00000637494 LAMA4Q16363 1823 aa22.24■■□□□ 1.15
CLN6-221ENST00000637494 DUSP11O75319 330 aaKnown RBP22.24■■□□□ 1.15
CLN6-221ENST00000637494 GSPT1P15170 499 aaKnown RBP22.24■■□□□ 1.15
CLN6-221ENST00000637494 CNTN2Q02246 1040 aa22.24■■□□□ 1.15
CLN6-221ENST00000637494 ZNF543Q08ER8 600 aa22.24■■□□□ 1.15
CLN6-221ENST00000637494 FAM133AQ8N9E0 248 aa22.24■■□□□ 1.15
CLN6-221ENST00000637494 TSEN34Q9BSV6 310 aaKnown RBP22.24■■□□□ 1.15
CLN6-221ENST00000637494 B4E1Z4 1266 aa22.23■■□□□ 1.15
CLN6-221ENST00000637494 NUP133Q8WUM0 1156 aa22.23■■□□□ 1.15
CLN6-221ENST00000637494 ZSCAN10Q96SZ4 725 aaPredicted RBP22.23■■□□□ 1.15
CLN6-221ENST00000637494 UBAC1Q9BSL1 405 aa22.23■■□□□ 1.15
CLN6-221ENST00000637494 MDM2Q00987 491 aaPredicted RBP22.22■■□□□ 1.15
CLN6-221ENST00000637494 TRDNQ13061 729 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 MUM1L1Q5H9M0 696 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 C1orf53Q5VUE5 145 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 PCSK9Q8NBP7 692 aaKnown RBP22.22■■□□□ 1.15
CLN6-221ENST00000637494 PNMA1Q8ND90 353 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 FGD4Q96M96 766 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 CYP39A1Q9NYL5 469 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 ADD3Q9UEY8 706 aaKnown RBP22.22■■□□□ 1.15
CLN6-221ENST00000637494 SYNRGQ9UMZ2 1314 aa22.22■■□□□ 1.15
CLN6-221ENST00000637494 MOXD2PA6NHM9 499 aa22.21■■□□□ 1.15
CLN6-221ENST00000637494 ADAMTS4O75173 837 aa22.21■■□□□ 1.15
CLN6-221ENST00000637494 C6orf222P0C671 652 aaPredicted RBP22.21■■□□□ 1.15
CLN6-221ENST00000637494 SNHG28P0DPA3 235 aa22.21■■□□□ 1.15
CLN6-221ENST00000637494 TRIM60Q495X7 471 aa22.21■■□□□ 1.15
CLN6-221ENST00000637494 NOL8Q76FK4 1167 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms