RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CSADQ9Y600 493 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 DDX49Q9Y6V7 483 aaKnown RBP24.19■■□□□ 1.46
CLN8-213ENST00000637156 C19orf81C9J6K1 198 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 VCAM1P19320 739 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 GNA11P29992 359 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 NASPP49321 788 aaPredicted RBP24.18■■□□□ 1.46
CLN8-213ENST00000637156 SKOR2Q2VWA4 1001 aaPredicted RBP24.18■■□□□ 1.46
CLN8-213ENST00000637156 RILPL1Q5EBL4 403 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 ANKRD13AQ8IZ07 590 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 ZNF526Q8TF50 670 aaPredicted RBP24.18■■□□□ 1.46
CLN8-213ENST00000637156 CLMNQ96JQ2 1002 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 PCDHA1Q9Y5I3 950 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 DOCK1Q14185 1865 aa24.18■■□□□ 1.46
CLN8-213ENST00000637156 ESYT2A0FGR8 921 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 HMGCS2P54868 508 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 TTLL12Q14166 644 aaPredicted RBP24.17■■□□□ 1.46
CLN8-213ENST00000637156 SF3A1Q15459 793 aaKnown RBP24.17■■□□□ 1.46
CLN8-213ENST00000637156 PIK3AP1Q6ZUJ8 805 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 FAM160B2Q86V87 743 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 UBE2HP62256 183 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 PGBD1Q96JS3 809 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 AMNQ9BXJ7 453 aa24.17■■□□□ 1.46
CLN8-213ENST00000637156 KLHL40Q2TBA0 621 aa24.16■■□□□ 1.46
CLN8-213ENST00000637156 TPRNQ4KMQ1 711 aa24.16■■□□□ 1.46
CLN8-213ENST00000637156 LDHDQ86WU2 507 aa24.16■■□□□ 1.46
CLN8-213ENST00000637156 C12orf42Q96LP6 360 aa24.16■■□□□ 1.46
CLN8-213ENST00000637156 SLC39A14Q15043 492 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 PTPAQ15257 358 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 FBXO11Q86XK2 927 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 PRPF38AQ8NAV1 312 aaKnown RBP24.15■■□□□ 1.46
CLN8-213ENST00000637156 RANBP17Q9H2T7 1088 aaKnown RBP24.15■■□□□ 1.46
CLN8-213ENST00000637156 RPAP3Q9H6T3 665 aaPredicted RBP24.15■■□□□ 1.46
CLN8-213ENST00000637156 ELP3Q9H9T3 547 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 PCDHB6Q9Y5E3 794 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 YEATS4O95619 227 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 ATP2B1P20020 1258 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 PPP1R18Q6NYC8 613 aa24.15■■□□□ 1.46
CLN8-213ENST00000637156 WNT7AO00755 349 aa24.14■■□□□ 1.45
CLN8-213ENST00000637156 LDLRAD1Q5T700 205 aa24.14■■□□□ 1.45
CLN8-213ENST00000637156 SAMD1Q6SPF0 538 aaPredicted RBP24.14■■□□□ 1.45
CLN8-213ENST00000637156 ARMC9Q7Z3E5 817 aa24.14■■□□□ 1.45
CLN8-213ENST00000637156 RIC8AQ9NPQ8 531 aa24.14■■□□□ 1.45
CLN8-213ENST00000637156 BIN2Q9UBW5 565 aaPredicted RBP24.14■■□□□ 1.45
CLN8-213ENST00000637156 ADCY7P51828 1080 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 PPATQ06203 517 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 STK38Q15208 465 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 SH3D19Q5HYK7 790 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 ERO1BQ86YB8 467 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 SLF1Q9BQI6 1058 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 TANGO6Q9C0B7 1094 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 PSTPIP2Q9H939 334 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 ZNF408Q9H9D4 720 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 SPTLC2O15270 562 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 TAL1P17542 331 aaPredicted RBP24.13■■□□□ 1.45
CLN8-213ENST00000637156 USH1GQ495M9 461 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 RBM46Q8TBY0 533 aaKnown RBP24.13■■□□□ 1.45
CLN8-213ENST00000637156 BICD2Q8TD16 824 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 PCDHA7Q9UN72 937 aa24.13■■□□□ 1.45
CLN8-213ENST00000637156 IRF6O14896 467 aa24.12■■□□□ 1.45
CLN8-213ENST00000637156 FLOT1O75955 427 aa24.12■■□□□ 1.45
CLN8-213ENST00000637156 CCDC174Q6PII3 467 aa24.12■■□□□ 1.45
CLN8-213ENST00000637156 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.12■■□□□ 1.45
CLN8-213ENST00000637156 TMEM260Q9NX78 707 aa24.12■■□□□ 1.45
CLN8-213ENST00000637156 PHIPQ8WWQ0 1821 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 CCDC194A0A1B0GVG4 234 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 MRPL12P52815 198 aaKnown RBP24.11■■□□□ 1.45
CLN8-213ENST00000637156 JAKMIP3Q5VZ66 844 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 REXO1Q8N1G1 1221 aaKnown RBP24.11■■□□□ 1.45
CLN8-213ENST00000637156 KCNG4Q8TDN1 519 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 MYH15Q9Y2K3 1946 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 SPDYE5A6NIY4 337 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 MARCKSP29966 332 aaPredicted RBP24.11■■□□□ 1.45
CLN8-213ENST00000637156 ME1P48163 572 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 TRAPPC10P48553 1259 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 CLK2P49760 499 aaKnown RBP24.11■■□□□ 1.45
CLN8-213ENST00000637156 CUL5Q93034 780 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 OTUD5Q96G74 571 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 TMOD4Q9NZQ9 345 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 PPP1R9AQ9ULJ8 1098 aa24.11■■□□□ 1.45
CLN8-213ENST00000637156 ZNF536O15090 1300 aa24.1■■□□□ 1.45
CLN8-213ENST00000637156 MBD3O95983 291 aa24.1■■□□□ 1.45
CLN8-213ENST00000637156 NOL7Q9UMY1 257 aaKnown RBP24.1■■□□□ 1.45
CLN8-213ENST00000637156 PAPPA2Q9BXP8 1791 aa24.1■■□□□ 1.45
CLN8-213ENST00000637156 GOLGA6L4A6NEF3 574 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L15C9J2P7 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L13C9JLJ4 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L11C9JVI0 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L18D6R9N7 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L22D6RA61 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L17D6RBQ6 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L19D6RCP7 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L20D6RJB6 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 OPLAHO14841 1288 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L24Q0WX57 530 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 ZNF174Q15697 407 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 UBE2SQ16763 222 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 INF2Q27J81 1249 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 ADALQ6DHV7 355 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 USP17L6PQ6QN14 398 aa24.09■■□□□ 1.45
CLN8-213ENST00000637156 CATSPERGQ6ZRH7 1159 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms