RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SPATA31A6Q5VVP1 1343 aa21.32■■□□□ 1
CLN5-216ENST00000636780 A0A0U1RQG5 324 aaPredicted RBP21.32■■□□□ 1
CLN5-216ENST00000636780 N4BP3O15049 544 aa21.32■■□□□ 1
CLN5-216ENST00000636780 BMP15O95972 392 aa21.32■■□□□ 1
CLN5-216ENST00000636780 KIAA0825Q8IV33 1275 aa21.32■■□□□ 1
CLN5-216ENST00000636780 ZC3H12CQ9C0D7 883 aaKnown RBP21.32■■□□□ 1
CLN5-216ENST00000636780 ZSWIM4Q9H7M6 989 aa21.32■■□□□ 1
CLN5-216ENST00000636780 LAMB1P07942 1786 aa21.32■■□□□ 1
CLN5-216ENST00000636780 THSD7AQ9UPZ6 1657 aa21.32■■□□□ 1
CLN5-216ENST00000636780 NRDCO43847 1150 aa21.32■■□□□ 1
CLN5-216ENST00000636780 SLU7O95391 586 aaKnown RBP21.32■■□□□ 1
CLN5-216ENST00000636780 PLCG1P19174 1290 aa21.32■■□□□ 1
CLN5-216ENST00000636780 FBXO38Q6PIJ6 1188 aa21.32■■□□□ 1
CLN5-216ENST00000636780 ZNF622Q969S3 477 aaKnown RBP eCLIP21.32■■□□□ 1
CLN5-216ENST00000636780 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
CLN5-216ENST00000636780 GTPBP6O43824 516 aaPredicted RBP21.31■■□□□ 1
CLN5-216ENST00000636780 PDHBP11177 359 aa21.31■■□□□ 1
CLN5-216ENST00000636780 FCER1AP12319 257 aa21.31■■□□□ 1
CLN5-216ENST00000636780 TRAPPC10P48553 1259 aa21.31■■□□□ 1
CLN5-216ENST00000636780 KRT27Q7Z3Y8 459 aa21.31■■□□□ 1
CLN5-216ENST00000636780 ROBO3Q96MS0 1386 aa21.31■■□□□ 1
CLN5-216ENST00000636780 ONECUT3O60422 494 aaPredicted RBP21.31■■□□□ 1
CLN5-216ENST00000636780 TDP2O95551 362 aa21.31■■□□□ 1
CLN5-216ENST00000636780 GYPCP04921 128 aa21.31■■□□□ 1
CLN5-216ENST00000636780 TCP11L1Q9NUJ3 509 aa21.31■■□□□ 1
CLN5-216ENST00000636780 AKR1B15C9JRZ8 316 aaPredicted RBP21.3■■□□□ 1
CLN5-216ENST00000636780 PAK1Q13153 545 aa21.3■■□□□ 1
CLN5-216ENST00000636780 IRF2BP1Q8IU81 584 aa21.3■■□□□ 1
CLN5-216ENST00000636780 RRP36Q96EU6 259 aaKnown RBP21.3■■□□□ 1
CLN5-216ENST00000636780 CARD6Q9BX69 1037 aa21.3■■□□□ 1
CLN5-216ENST00000636780 ZNF831Q5JPB2 1677 aa21.3■■□□□ 1
CLN5-216ENST00000636780 ARHGAP6O43182 974 aa21.3■■□□□ 1
CLN5-216ENST00000636780 SLC37A4O43826 429 aa21.3■■□□□ 1
CLN5-216ENST00000636780 EDIL3O43854 480 aa21.3■■□□□ 1
CLN5-216ENST00000636780 LONP1P36776 959 aaKnown RBP21.3■■□□□ 1
CLN5-216ENST00000636780 ACRBPQ8NEB7 543 aa21.3■■□□□ 1
CLN5-216ENST00000636780 NUDT12Q9BQG2 462 aa21.3■■□□□ 1
CLN5-216ENST00000636780 G3V3G9 751 aa21.29■■□□□ 1
CLN5-216ENST00000636780 GNAQP50148 359 aa21.29■■□□□ 1
CLN5-216ENST00000636780 DCAF8Q5TAQ9 597 aa21.29■■□□□ 1
CLN5-216ENST00000636780 ZMYND12Q9H0C1 365 aa21.29■■□□□ 1
CLN5-216ENST00000636780 KCND1Q9NSA2 647 aa21.29■■□□□ 1
CLN5-216ENST00000636780 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
CLN5-216ENST00000636780 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
CLN5-216ENST00000636780 DDX60LQ5H9U9 1706 aaKnown RBP21.29■■□□□ 1
CLN5-216ENST00000636780 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
CLN5-216ENST00000636780 ADRA2BP18089 450 aa21.29■■□□□ 1
CLN5-216ENST00000636780 KLK7P49862 253 aa21.29■■□□□ 1
CLN5-216ENST00000636780 CCDC178Q5BJE1 867 aa21.29■■□□□ 1
CLN5-216ENST00000636780 PPFIBP1Q86W92 1011 aa21.29■■□□□ 1
CLN5-216ENST00000636780 POTEMA6NI47 508 aa21.28■■□□□ 1
CLN5-216ENST00000636780 KCNJ18B7U540 433 aa21.28■■□□□ 1
CLN5-216ENST00000636780 KLRC4O43908 158 aa21.28■■□□□ 1
CLN5-216ENST00000636780 MMP10P09238 476 aa21.28■■□□□ 1
CLN5-216ENST00000636780 KCNJ12Q14500 433 aa21.28■■□□□ 1
CLN5-216ENST00000636780 C15orf52Q6ZUT6 534 aaKnown RBP21.28■■□□□ 1
CLN5-216ENST00000636780 CCDC34Q96HJ3 373 aa21.28■■□□□ 1
CLN5-216ENST00000636780 SH3GLB2Q9NR46 395 aa21.28■■□□□ 1
CLN5-216ENST00000636780 SRGNP10124 158 aa21.28■■□□□ 1
CLN5-216ENST00000636780 HOXA10P31260 410 aaPredicted RBP21.28■■□□□ 1
CLN5-216ENST00000636780 TXLNAP40222 546 aa21.28■■□□□ 1
CLN5-216ENST00000636780 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
CLN5-216ENST00000636780 STK4Q13043 487 aa21.28■■□□□ 1
CLN5-216ENST00000636780 CCDC93Q567U6 631 aa21.28■■□□□ 1
CLN5-216ENST00000636780 ZNF658Q5TYW1 1059 aaPredicted RBP21.28■■□□□ 1
CLN5-216ENST00000636780 CDC42EP5Q6NZY7 148 aa21.28■■□□□ 1
CLN5-216ENST00000636780 DYMQ7RTS9 669 aa21.28■■□□□ 1
CLN5-216ENST00000636780 CABP7Q86V35 215 aa21.28■■□□□ 1
CLN5-216ENST00000636780 SRRTQ9BXP5 876 aaKnown RBP21.28■■□□□ 1
CLN5-216ENST00000636780 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.28■■□□□ 1
CLN5-216ENST00000636780 LY75O60449 1722 aa21.28■■□□□ 1
CLN5-216ENST00000636780 NONOQ15233 471 aaKnown RBP eCLIP21.27■■□□□ 1
CLN5-216ENST00000636780 SOGA3Q5TF21 947 aa21.27■■□□□ 1
CLN5-216ENST00000636780 ARL6IP4Q66PJ3 421 aaKnown RBP21.27■■□□□ 1
CLN5-216ENST00000636780 CCDC148Q8NFR7 591 aa21.27■■□□□ 1
CLN5-216ENST00000636780 GAKO14976 1311 aa21.27■■□□□ 1
CLN5-216ENST00000636780 PBX1P40424 430 aa21.27■■□□□ 1
CLN5-216ENST00000636780 COPB1P53618 953 aaKnown RBP21.27■■□□□ 1
CLN5-216ENST00000636780 TCP11X2Q5H9J9 407 aa21.27■■□□□ 1
CLN5-216ENST00000636780 CHP1Q99653 195 aa21.27■■□□□ 1
CLN5-216ENST00000636780 MMTAG2Q9BU76 263 aaKnown RBP21.27■■□□□ 1
CLN5-216ENST00000636780 USP17L10C9JJH3 530 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 STX10O60499 249 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 TNNI2P48788 182 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 UBXN1Q04323 297 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 GLIS3Q8NEA6 775 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 ATP6V0A2Q9Y487 856 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 NUP88Q99567 741 aaPredicted RBP21.26■□□□□ 0.99
CLN5-216ENST00000636780 SPZ1Q9BXG8 430 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 L2HGDHQ9H9P8 463 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 ST7Q9NRC1 585 aa21.26■□□□□ 0.99
CLN5-216ENST00000636780 OR52Z1P0C646 297 aa21.25■□□□□ 0.99
CLN5-216ENST00000636780 ERVK-24P63145 666 aa21.25■□□□□ 0.99
CLN5-216ENST00000636780 MTERF4Q7Z6M4 381 aaKnown RBP21.25■□□□□ 0.99
CLN5-216ENST00000636780 SP8Q8IXZ3 490 aa21.25■□□□□ 0.99
CLN5-216ENST00000636780 CRAMP1Q96RY5 1269 aa21.25■□□□□ 0.99
CLN5-216ENST00000636780 C6orf50Q9HD87 102 aa21.25■□□□□ 0.99
CLN5-216ENST00000636780 SLC39A2Q9NP94 309 aa21.25■□□□□ 0.99
CLN5-216ENST00000636780 CCDC96Q2M329 555 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms