RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 HESX1Q9UBX0 185 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 GOLGA8SH3BPF8 625 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 ELF1P32519 619 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 BTDP43251 543 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 PRPSAP1Q14558 356 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 AFAP1L1Q8TED9 768 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 ATP2A3Q93084 1043 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 USH1CQ9Y6N9 552 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 POC1B-GALNT4F8VUJ3 575 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 EPHB1P54762 984 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 MEIS1O00470 390 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 NPR1P16066 1061 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 SERPINB6P35237 376 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 SLC9C1Q4G0N8 1177 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 C14orf93Q9H972 538 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 DDX25Q9UHL0 483 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 DIS3L2Q8IYB7 885 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 FRMD3A2A2Y4 597 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 SRGAP2CP0DJJ0 459 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 KRT27Q7Z3Y8 459 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 RSRC1Q96IZ7 334 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 NR1H4Q96RI1 486 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 RPS6KB1P23443 525 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 RCN2Q14257 317 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 RWDD4Q6NW29 188 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 ARMCX5Q6P1M9 558 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 OTUD7AQ8TE49 926 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 SLC38A10Q9HBR0 1119 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 TIAM1Q13009 1591 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 ACTN1P12814 892 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 KCTD2Q14681 263 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 PIDD1Q9HB75 910 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 KCNK3O14649 394 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 NXF1Q9UBU9 619 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 GSTA4O15217 222 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 MGEA5O60502 916 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 CDO1Q16878 200 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 VWA3BQ502W6 1294 aa19.56■□□□□ 0.72
CACNA1A-227ENST00000636549 ESRRBO95718 433 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 ANO1Q5XXA6 986 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 CEP85Q6P2H3 762 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 CD58P19256 250 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 PLA2G4DQ86XP0 818 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 ALDH1L1O75891 902 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 PHEXP78562 749 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 CNGA4Q8IV77 575 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 SLC39A2Q9NP94 309 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 ZNF277Q9NRM2 450 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 EFCAB5A4FU69 1503 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 RIMS2Q9UQ26 1411 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 PDE6CP51160 858 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
CACNA1A-227ENST00000636549 PCF11O94913 1555 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 HDXQ7Z353 690 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 AGRPO00253 132 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 SAMSN1Q9NSI8 373 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 MYL5Q02045 173 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 NFX1Q12986 1120 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 LGSNQ5TDP6 509 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 IQGAP2Q13576 1575 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 HAUS1Q96CS2 278 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 CARD6Q9BX69 1037 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 PPEF1O14829 653 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 KIF11P52732 1056 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 ACCSLQ4AC99 568 aa19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 AFF4Q9UHB7 1163 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-227ENST00000636549 SUCLG2Q96I99 432 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 KRT82Q9NSB4 513 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 KCNA6P17658 529 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 NPATQ14207 1427 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 NEMP1O14524 444 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 JAK2O60674 1132 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 YWHAGP61981 247 aaKnown RBP eCLIP19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 C1orf112Q9NSG2 853 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 SUCLA2Q9P2R7 463 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 USP17L12C9JPN9 530 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 USP17L21D6R901 530 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 UVSSAQ2YD98 709 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 TMEM259Q4ZIN3 620 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 BRAPQ7Z569 592 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 OCM2P0CE71 109 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 OCMP0CE72 109 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 VCPP55072 806 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 RPS6KA1Q15418 735 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 NCOA1Q15788 1441 aa19.53■□□□□ 0.72
CACNA1A-227ENST00000636549 FBXO11Q86XK2 927 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 LRGUKQ96M69 825 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 N4BP1O75113 896 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 IRX4P78413 519 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 TFAMQ00059 246 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 HS1BP3Q53T59 392 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 REXO1Q8N1G1 1221 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 VCXQ9H320 206 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 ICA1Q05084 483 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 PPARAQ07869 468 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms