RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GAKO14976 1311 aa5.1□□□□□ -1.59
SCN1A-210ENST00000635776 PALM3A6NDB9 673 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CCNT1O60563 726 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 PAFAH1B1P43034 410 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 TXNRD1Q16881 649 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 KRT26Q7Z3Y9 468 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 NOM1Q5C9Z4 860 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 SAMD3Q8N6K7 520 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 GOLGA5Q8TBA6 731 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC42Q96M95 316 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 FAM217BQ9NTX9 383 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 LIMA1Q9UHB6 759 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 PLSCR1O15162 318 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 ONECUT3O60422 494 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 TACC1O75410 805 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 UBXN1Q04323 297 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 METTL16Q86W50 562 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC155Q8N6L0 562 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 SNX29Q8TEQ0 813 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 AIFM3Q96NN9 605 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 IWS1Q96ST2 819 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 VAT1LQ9HCJ6 419 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 PYCARDQ9ULZ3 195 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 PLEKHA8P1O95397 391 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 USP11P51784 963 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 WHAMMP3Q1A5X7 153 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CCDC170Q8IYT3 715 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CAGE1Q8TC20 777 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 LMBR1Q8WVP7 490 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 TRMT1Q9NXH9 659 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 HERC5Q9UII4 1024 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 TULP1O00294 542 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 RIOK3O14730 519 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 GPSM2P81274 684 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 TBC1D8BQ0IIM8 1120 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CDC37Q16543 378 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CERKLQ49MI3 558 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 FAM160B2Q86V87 743 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 KRT222Q8N1A0 295 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 ZMYND15Q9H091 742 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 PSTPIP2Q9H939 334 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 KCNJ18B7U540 433 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 CHGBP05060 677 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 KCNJ12Q14500 433 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 TAF3Q5VWG9 929 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 C2CD5Q86YS7 1000 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 DHX37Q8IY37 1157 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 LARP4BQ92615 738 aaKnown RBP5.09□□□□□ -1.59
SCN1A-210ENST00000635776 GOPCQ9HD26 462 aa5.09□□□□□ -1.59
SCN1A-210ENST00000635776 B4DLN1 442 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 CETN3O15182 167 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC181Q5TID7 509 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 SH3RF3Q8TEJ3 882 aaPredicted RBP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 FAM20AQ96MK3 541 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 NOC4LQ9BVI4 516 aaKnown RBP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 SAP30BPQ9UHR5 308 aaKnown RBP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 FOXP2O15409 715 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 CALUO43852 315 aaPredicted RBP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 APBA3O96018 575 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 SSBP05455 408 aaKnown RBP eCLIP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 USP17L8P0C7I0 530 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 SARSP49591 514 aaKnown RBP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 COPB1P53618 953 aaKnown RBP5.09□□□□□ -1.6
SCN1A-210ENST00000635776 INF2Q27J81 1249 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 HS2ST1Q7LGA3 356 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 TAF4BQ92750 862 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 P2RX5Q93086 422 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 NBPF3Q9H094 633 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 PPP2R2CQ9Y2T4 447 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 FLT1P17948 1338 aa5.09□□□□□ -1.6
SCN1A-210ENST00000635776 A0A1B0GTH6 734 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 A6NNZ2 444 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ZBTB5O15062 677 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 RASA1P20936 1047 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 TUBB8Q3ZCM7 444 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ILDR1Q86SU0 546 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SRBD1Q8N5C6 995 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 CALR3Q96L12 384 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 BCL2L12Q9HB09 334 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 RNF14Q9UBS8 474 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 MRPL11Q9Y3B7 192 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 V9GYY5 206 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 AKR1B10O60218 316 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 RHOBTB3O94955 611 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 GYS1P13807 737 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 DPYDQ12882 1025 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SLFN13Q68D06 897 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ISM2Q6H9L7 571 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 NEK11Q8NG66 645 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 NEK9Q8TD19 979 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 JDP2Q8WYK2 163 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 CEP63Q96MT8 703 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 MPHOSPH6Q99547 160 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 CTNND2Q9UQB3 1225 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 MUTP22033 750 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ICA1Q05084 483 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PPP4R3AQ6IN85 833 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SYT10Q6XYQ8 523 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SH3RF1Q7Z6J0 888 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 MYOCDQ8IZQ8 938 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms