RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-206ENST00000634451 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 TIFAQ96CG3 184 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 TOX2Q96NM4 488 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
LINC00339-206ENST00000634451 PBX4Q9BYU1 374 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
LINC00339-206ENST00000634451 ZNF576Q9H609 170 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 CXXC1Q9P0U4 656 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-206ENST00000634451 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 CYP2C18P33260 490 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 COPB2P35606 906 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 FAM126BQ8IXS8 530 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 ANKRD35Q8N283 1001 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 KBTBD3Q8NAB2 608 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
LINC00339-206ENST00000634451 APPBP2Q92624 585 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 MTMR4Q9NYA4 1195 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 ZNF536O15090 1300 aa15.39■□□□□ 0.05
LINC00339-206ENST00000634451 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-206ENST00000634451 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-206ENST00000634451 SOWAHBA6NEL2 793 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 RNF113AO15541 343 aaKnown RBP15.38■□□□□ 0.05
LINC00339-206ENST00000634451 ZBED4O75132 1171 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 CST5P28325 142 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-206ENST00000634451 TDO2P48775 406 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 ADGRE1Q14246 886 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 RASIP1Q5U651 963 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 MFSD5Q6N075 450 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 CXCL17Q6UXB2 119 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 ZNF365Q70YC5 407 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 NUP133Q8WUM0 1156 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 VTI1AQ96AJ9 217 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 GLT1D1Q96MS3 346 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 PDGFCQ9NRA1 345 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
LINC00339-206ENST00000634451 CHD7Q9P2D1 2997 aa15.38■□□□□ 0.05
LINC00339-206ENST00000634451 ARVCFO00192 962 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 FOXP2O15409 715 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 NMT2O60551 498 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 APPP05067 770 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 GJA9P57773 515 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 SLFN13Q68D06 897 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 ZNF467Q7Z7K2 595 aaPredicted RBP15.37■□□□□ 0.05
LINC00339-206ENST00000634451 MSL3Q8N5Y2 521 aaKnown RBP15.37■□□□□ 0.05
LINC00339-206ENST00000634451 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 A1CFQ9NQ94 594 aaKnown RBP15.37■□□□□ 0.05
LINC00339-206ENST00000634451 RAPGEFL1Q9UHV5 662 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 GRIN2DO15399 1336 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 ELP1O95163 1332 aa15.37■□□□□ 0.05
LINC00339-206ENST00000634451 TMEM265A0A087WTH1 108 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
LINC00339-206ENST00000634451 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 MS4A1P11836 297 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 PSMC6P62333 389 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 MUM1L1Q5H9M0 696 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 CCDC129Q6ZRS4 1044 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC00339-206ENST00000634451 EEPD1Q7L9B9 569 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 MKL1Q969V6 931 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 VWCEQ96DN2 955 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 ABHD16BQ9H3Z7 469 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 FEM1BQ9UK73 627 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 RCAN3Q9UKA8 241 aa15.36■□□□□ 0.05
LINC00339-206ENST00000634451 YBX2Q9Y2T7 364 aaKnown RBP15.36■□□□□ 0.05
LINC00339-206ENST00000634451 NCOR1O75376 2440 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 TTLL1O95922 423 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 CD4P01730 458 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 BMP3P12645 472 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 SMPD1P17405 629 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 MCCP23508 829 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 CCDC85BQ15834 202 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-206ENST00000634451 GIMAP6Q6P9H5 292 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 CCDC174Q6PII3 467 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 KCTD1Q719H9 257 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
LINC00339-206ENST00000634451 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-206ENST00000634451 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-206ENST00000634451 GMCL1P1Q8NEA9 526 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 NKX2-4Q9H2Z4 354 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
LINC00339-206ENST00000634451 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-206ENST00000634451 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
LINC00339-206ENST00000634451 MYOGP15173 224 aa15.34■□□□□ 0.05
LINC00339-206ENST00000634451 RABGGTBP53611 331 aa15.34■□□□□ 0.05
LINC00339-206ENST00000634451 CCL23P55773 120 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms