RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 CHMP4BQ9H444 224 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-213ENST00000629667 SLC38A10Q9HBR0 1119 aa18.69■□□□□ 0.58
PDLIM3-213ENST00000629667 FEM1BQ9UK73 627 aa18.69■□□□□ 0.58
PDLIM3-213ENST00000629667 MYO9BQ13459 2157 aa18.69■□□□□ 0.58
PDLIM3-213ENST00000629667 MUC3AQ02505 3323 aa18.69■□□□□ 0.58
PDLIM3-213ENST00000629667 GSG1L2A8MUP6 293 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 GRXCR1A8MXD5 290 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 PBX2P40425 430 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 PSRC1Q6PGN9 363 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 ARMCX2Q7L311 632 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
PDLIM3-213ENST00000629667 TNFRSF10AO00220 468 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 ACRP10323 421 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 OAZ1P54368 228 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 ZNF365Q70YC5 407 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 FAM126BQ8IXS8 530 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 FGD4Q96M96 766 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 GBF1Q92538 1859 aa18.67■□□□□ 0.58
PDLIM3-213ENST00000629667 TDO2P48775 406 aa18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 RASIP1Q5U651 963 aa18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 NOL8Q76FK4 1167 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 MKL1Q969V6 931 aa18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 PRDM12Q9H4Q4 367 aa18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 HOMER2Q9NSB8 354 aa18.66■□□□□ 0.58
PDLIM3-213ENST00000629667 TTC28Q96AY4 2481 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 IGKV6D-41A0A0C4DH26 115 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 SMARCA5O60264 1052 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 PRDM1O75626 825 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 TTLL1O95922 423 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 APPP05067 770 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 LRRC47Q8N1G4 583 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 KBTBD3Q8NAB2 608 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 APPBP2Q92624 585 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 MTIF3Q9H2K0 278 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 ECHDC1Q9NTX5 307 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 MTMR4Q9NYA4 1195 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 MSRAQ9UJ68 235 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 ISY1Q9ULR0 285 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 SYNPO2Q9UMS6 1093 aa18.65■□□□□ 0.58
PDLIM3-213ENST00000629667 FDX1P10109 184 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 BMP3P12645 472 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 GNAT2P19087 354 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 CYP2C18P33260 490 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 BEX3Q00994 111 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 CNTN2Q02246 1040 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 TNFAIP2Q03169 654 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 RAB30Q15771 203 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 SLFN13Q68D06 897 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 GMCL1P1Q8NEA9 526 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 ACAD9Q9H845 621 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 IL23AQ9NPF7 189 aa18.64■□□□□ 0.57
PDLIM3-213ENST00000629667 CTAGE5O15320 804 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 GPAA1O43292 621 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 CD4P01730 458 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 NKX3-2P78367 333 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 CXCL17Q6UXB2 119 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 HERVK_113Q902F9 699 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 THEGQ9P2T0 379 aa18.63■□□□□ 0.57
PDLIM3-213ENST00000629667 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 TMEM232C9JQI7 657 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 RNF113AO15541 343 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 CABYRO75952 493 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 FGBP02675 491 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 TSPY3P0CV98 308 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 TSPY8P0CW00 308 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 IGFBP4P22692 258 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 STAT2P52630 851 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 IKQ13123 557 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 FAM133AQ8N9E0 248 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 GPATCH3Q96I76 525 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 HIPK3Q9H422 1215 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 SLC28A3Q9HAS3 691 aa18.62■□□□□ 0.57
PDLIM3-213ENST00000629667 ASB14A6NK59 587 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 ITGA7Q13683 1181 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 CCDC85BQ15834 202 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 TLK2Q86UE8 772 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 CHURC1Q8WUH1 139 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 ASB2Q96Q27 587 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 A1CFQ9NQ94 594 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 RNF146Q9NTX7 359 aa18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-213ENST00000629667 ASTN1O14525 1302 aa18.6■□□□□ 0.57
PDLIM3-213ENST00000629667 PATL2C9JE40 543 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-213ENST00000629667 ZEB2O60315 1214 aa18.6■□□□□ 0.57
PDLIM3-213ENST00000629667 COL9A1P20849 921 aa18.6■□□□□ 0.57
PDLIM3-213ENST00000629667 PDE4BQ07343 736 aa18.6■□□□□ 0.57
PDLIM3-213ENST00000629667 ADGRE1Q14246 886 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms