RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 KCNJ12Q14500 433 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
SHPRH-211ENST00000629427 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 MTMR3Q13615 1198 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 TMTC4Q5T4D3 741 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 ADAT2Q7Z6V5 191 aaKnown RBP12.89□□□□□ -0.35
SHPRH-211ENST00000629427 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.352e-8■■■■■ 52.2
SHPRH-211ENST00000629427 RIC8AQ9NPQ8 531 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 ADCY8P40145 1251 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 CCDC13Q8IYE1 715 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 PPM1KQ8N3J5 372 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-211ENST00000629427 OGFRQ9NZT2 677 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 IPO11Q9UI26 975 aaKnown RBP12.89□□□□□ -0.35
SHPRH-211ENST00000629427 KIAA0556O60303 1618 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 RINT1Q6NUQ1 792 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 LMNTD2Q8IXW0 634 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 CLRN2A0PK11 232 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 DDX41Q9UJV9 622 aaKnown RBP12.89□□□□□ -0.35
SHPRH-211ENST00000629427 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
SHPRH-211ENST00000629427 N4BP1O75113 896 aaKnown RBP12.89□□□□□ -0.35
SHPRH-211ENST00000629427 GUCY2FP51841 1108 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 ATP5JP18859 108 aa12.89□□□□□ -0.35
SHPRH-211ENST00000629427 OSBPP22059 807 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 KRT71Q3SY84 523 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 AP5M1Q9H0R1 490 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 NRBP2Q9NSY0 501 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 KRIT1O00522 736 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 RGS16O15492 202 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 ARHGEF6Q15052 776 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 PRKAG2Q9UGJ0 569 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 A6NJR5 290 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 H0YCG3 227 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 PPEF1O14829 653 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 BUB1O43683 1085 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 RBBP5Q15291 538 aaKnown RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 GRK7Q8WTQ7 553 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 ARHGAP6O43182 974 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 LRFN2Q9ULH4 789 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 CHL1O00533 1208 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 XPAP23025 273 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 CHMP6Q96FZ7 201 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 STK38LQ9Y2H1 464 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 MYCP01106 439 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-211ENST00000629427 OR52Z1P0C646 297 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 ECE1P42892 770 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 CNKSR1Q969H4 720 aa12.88□□□□□ -0.35
SHPRH-211ENST00000629427 PARD3BQ8TEW8 1205 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 MIS12Q9H081 205 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 EFCC1Q9HA90 598 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 PCDHB4Q9Y5E5 795 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 ZMYM6O95789 1325 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 CHRNDQ07001 517 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 TRIM37O94972 964 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 TROVE2P10155 538 aaKnown RBP eCLIP12.87□□□□□ -0.35
SHPRH-211ENST00000629427 STX2P32856 288 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 ELF2Q15723 593 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 TAB3Q8N5C8 712 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-211ENST00000629427 NCAPGQ9BPX3 1015 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 PLEKHG3A1L390 1219 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 RNF8O76064 485 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 KRT3P12035 628 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 INPP5BP32019 993 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 ME3Q16798 604 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-211ENST00000629427 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
SHPRH-211ENST00000629427 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 IRAK4Q9NWZ3 460 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 MYO5CQ9NQX4 1742 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 CYP4A11Q02928 519 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 SLFN13Q68D06 897 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 KSR1Q8IVT5 923 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 SAR1BQ9Y6B6 198 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
SHPRH-211ENST00000629427 POLR2BP30876 1174 aaKnown RBP12.86□□□□□ -0.35
SHPRH-211ENST00000629427 RAPH1Q70E73 1250 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 CSRNP1Q96S65 589 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 A6NNZ2 444 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 LMNB1P20700 586 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms