RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 MOXD2PA6NHM9 499 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 DUSP11O75319 330 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 CST5P28325 142 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 MCMDC2Q4G0Z9 681 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 FAM109BQ6ICB4 259 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 CCSAPQ6IQ19 270 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 DEFB123Q8N688 67 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 ABHD16BQ9H3Z7 469 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 ACAD9Q9H845 621 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 STX8Q9UNK0 236 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 MCM3APO60318 1980 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 LAMA2P24043 3122 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 TRIM43BA6NCK2 446 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 MCCP23508 829 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 TLE2Q04725 743 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 SMC5Q8IY18 1101 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 TRIM43Q96BQ3 446 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 TOX2Q96NM4 488 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 KATNBL1Q9H079 304 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 UPF3AQ9H1J1 476 aaKnown RBP14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 INCENPQ9NQS7 918 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 PRDM5Q9NQX1 630 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 TCP11L1Q9NUJ3 509 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 MTMR10Q9NXD2 777 aa14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 ZHX1Q9UKY1 873 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-247ENST00000628347 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 FGAP02671 866 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 CLTBP09497 229 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 ACLYP53396 1101 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 NKX3-2P78367 333 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 Q7L0L9 218 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 ARMCX2Q7L311 632 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 ANKRD33Q7Z3H0 272 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 SH3RF1Q7Z6J0 888 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 DCAF4Q8WV16 495 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 FAM227BQ96M60 508 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 AGBL1Q96MI9 1066 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 A1CFQ9NQ94 594 aaKnown RBP14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 RNF146Q9NTX7 359 aa14.74□□□□□ -0.05
SOX2-OT-247ENST00000628347 KIAA0355O15063 1070 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 NMT2O60551 498 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 HSPD1P10809 573 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 PCP11498 1178 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 GJA9P57773 515 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 IKQ13123 557 aaPredicted RBP14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 BTNL9Q6UXG8 535 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 BADQ92934 168 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 TRERF1Q96PN7 1200 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 HOMER2Q9NSB8 354 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 PRR12Q9ULL5 1215 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 ISY1Q9ULR0 285 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 STXBP5LQ9Y2K9 1186 aa14.73□□□□□ -0.05
SOX2-OT-247ENST00000628347 ELP1O95163 1332 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 CCDC171Q6TFL3 1326 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 ASB14A6NK59 587 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 ADCY6O43306 1168 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 CNTN2Q02246 1040 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 KCNA10Q16322 511 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 CCDC144BQ3MJ40 725 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 ZNF589Q86UQ0 364 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 CCDC144CPQ8IYA2 1237 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 PCSK9Q8NBP7 692 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 RANBP17Q9H2T7 1088 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 OSBPL3Q9H4L5 887 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 SPC25Q9HBM1 224 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 LRRC37A2A6NM11 1700 aa14.72□□□□□ -0.05
SOX2-OT-247ENST00000628347 MYADML2A6NDP7 307 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 SOWAHBA6NEL2 793 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 ICAM1P05362 532 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 TOP1P11387 765 aaKnown RBP14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 ALAS1P13196 640 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 ITGB8P26012 769 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 NT5C2P49902 561 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 SHHQ15465 462 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 C9orf50Q5SZB4 431 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 RASGRP2Q7LDG7 609 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 TMEM47Q9BQJ4 181 aa14.71□□□□□ -0.05
SOX2-OT-247ENST00000628347 LCTP09848 1927 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 DCDC2CA8MYV0 355 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 CTAGE5O15320 804 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 PQBP1O60828 265 aaKnown RBP14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 C6orf222P0C671 652 aaPredicted RBP14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 CDK7P50613 346 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 MFAP1P55081 439 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms