RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SAPCD2Q86UD0 394 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 SLCO6A1Q86UG4 719 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 SAMD11Q96NU1 681 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 RBM15Q96T37 977 aaKnown RBP eCLIP5.74□□□□□ -1.49
VBP1-204ENST00000625964 SPATA25Q9BR10 227 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 NOC4LQ9BVI4 516 aaKnown RBP5.74□□□□□ -1.49
VBP1-204ENST00000625964 REV1Q9UBZ9 1251 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 F6X3S4 739 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 RGS13O14921 159 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 FOXO4P98177 505 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 MRPL58Q14197 206 aaKnown RBP5.74□□□□□ -1.49
VBP1-204ENST00000625964 KIR3DS1Q14943 382 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 ZPBP2Q6X784 338 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 NUP43Q8NFH3 380 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 MENTQ9BUN1 341 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 KLHL3Q9UH77 587 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 CCDC9Q9Y3X0 531 aaKnown RBP5.74□□□□□ -1.49
VBP1-204ENST00000625964 PMF1-BGLAPU3KQ54 211 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 CNR2P34972 360 aa5.73□□□□□ -1.49
VBP1-204ENST00000625964 GDF5P43026 501 aa5.73□□□□□ -1.49
VBP1-204ENST00000625964 NBPF9Q3BBW0 867 aa5.73□□□□□ -1.49
VBP1-204ENST00000625964 KIF2CQ99661 725 aa5.73□□□□□ -1.49
VBP1-204ENST00000625964 RNF38Q9H0F5 515 aa5.73□□□□□ -1.49
VBP1-204ENST00000625964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.73□□□□□ -1.49
VBP1-204ENST00000625964 CYR61O00622 381 aa5.72□□□□□ -1.49
VBP1-204ENST00000625964 NOBOXO60393 691 aa5.72□□□□□ -1.49
VBP1-204ENST00000625964 HTRA3P83110 453 aa5.72□□□□□ -1.49
VBP1-204ENST00000625964 ZNF200P98182 395 aaPredicted RBP5.72□□□□□ -1.49
VBP1-204ENST00000625964 LNPKQ9C0E8 428 aa5.72□□□□□ -1.49
VBP1-204ENST00000625964 TLR6Q9Y2C9 796 aa5.72□□□□□ -1.49
VBP1-204ENST00000625964 FAM221AA4D161 298 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 SIGLEC6O43699 453 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 ZNF20P17024 532 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 GJA9P57773 515 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 TMC3Q7Z5M5 1100 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 GATAD2BQ8WXI9 593 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 MRIQ9BWK5 157 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 SLITRK6Q9H5Y7 841 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 ERVK13-1Q9NX77 482 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 DUSP10Q9Y6W6 482 aa5.71□□□□□ -1.5
VBP1-204ENST00000625964 HTR3BO95264 441 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 PLA2G1BP04054 148 aaKnown RBP5.7□□□□□ -1.5
VBP1-204ENST00000625964 FBLN1P23142 703 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 RAD51AP2Q09MP3 1159 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 MLECQ14165 292 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 PAQR3Q6TCH7 311 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 CARFQ8N187 725 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 PHC3Q8NDX5 983 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 FAN1Q9Y2M0 1017 aa5.7□□□□□ -1.5
VBP1-204ENST00000625964 A0A1B0GTL3 188 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 SRGAP3O43295 1099 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 PRAMEF1O95521 474 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 CYBBP04839 570 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 C6P13671 934 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 GBP2P32456 591 aaPredicted RBP5.69□□□□□ -1.5
VBP1-204ENST00000625964 LMNB2Q03252 620 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 NBPF12Q5TAG4 269 aaPredicted RBP5.69□□□□□ -1.5
VBP1-204ENST00000625964 RELL1Q8IUW5 271 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 TMEM87AQ8NBN3 555 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 RGS22Q8NE09 1264 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 ZNF526Q8TF50 670 aaPredicted RBP5.69□□□□□ -1.5
VBP1-204ENST00000625964 DDX1Q92499 740 aaKnown RBP5.69□□□□□ -1.5
VBP1-204ENST00000625964 IMPACTQ9P2X3 320 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 A0A1W2PQ27 194 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 A0A1W2PQ64 194 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 A0A1W2PQD8 194 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 TACR2P21452 398 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 BMP8BP34820 402 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 PWP1Q13610 501 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 BNC2Q6ZN30 1099 aaPredicted RBP5.69□□□□□ -1.5
VBP1-204ENST00000625964 LOXL4Q96JB6 756 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 TMEM74Q96NL1 305 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 GGT7Q9UJ14 662 aa5.69□□□□□ -1.5
VBP1-204ENST00000625964 MINDY4BA8MYZ0 360 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 ZNF205O95201 554 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 PF4P02776 101 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 NCAM1P13591 858 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 FAM160A1Q05DH4 1040 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 HS2ST1Q7LGA3 356 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 C8orf49Q96NF6 230 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 CDADC1Q9BWV3 514 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 BACH2Q9BYV9 841 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 CHST7Q9NS84 486 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 KBTBD4Q9NVX7 518 aa5.68□□□□□ -1.5
VBP1-204ENST00000625964 UBOX5O94941 541 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 PLATP00750 562 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 ATF2P15336 505 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 ACVRL1P37023 503 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 CEBPAP49715 358 aaPredicted RBP5.67□□□□□ -1.5
VBP1-204ENST00000625964 MVKQ03426 396 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 DLX2Q07687 328 aaPredicted RBP5.67□□□□□ -1.5
VBP1-204ENST00000625964 CAMK2GQ13555 558 aaPredicted RBP5.67□□□□□ -1.5
VBP1-204ENST00000625964 SNAP47Q5SQN1 464 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 USP51Q70EK9 711 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 DVL3Q92997 716 aaPredicted RBP5.67□□□□□ -1.5
VBP1-204ENST00000625964 RHOVQ96L33 236 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms