RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
SSBP4-215ENST00000625926 SYN1P17600 705 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 IMMTQ16891 758 aaKnown RBP12.76□□□□□ -0.37
SSBP4-215ENST00000625926 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 RNF146Q9NTX7 359 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 SYNGAP1Q96PV0 1343 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 A0A0G2JMZ2 1700 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 ALAS1P13196 640 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 GSPT1P15170 499 aaKnown RBP12.75□□□□□ -0.37
SSBP4-215ENST00000625926 ATN1P54259 1190 aaPredicted RBP12.75□□□□□ -0.37
SSBP4-215ENST00000625926 SNAP25P60880 206 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 LRRC41Q15345 812 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 CCDC178Q5BJE1 867 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 TTBK2Q6IQ55 1244 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 DGKHQ86XP1 1220 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 GDF15Q99988 308 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 GPCPD1Q9NPB8 672 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 FAM184BQ9ULE4 1060 aa12.75□□□□□ -0.37
SSBP4-215ENST00000625926 BRCA2P51587 3418 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 NEDD4P46934 1319 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 KDM4AO75164 1064 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 ICAM1P05362 532 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 PDHBP11177 359 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 BMP8BP34820 402 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 SLC16A2P36021 539 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 RNF180Q86T96 592 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 IQCA1Q86XH1 822 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 FAM133AQ8N9E0 248 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 RUFY2Q8WXA3 655 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 ABHD16BQ9H3Z7 469 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 CCPG1Q9ULG6 757 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 MYH7P12883 1935 aa12.74□□□□□ -0.37
SSBP4-215ENST00000625926 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-215ENST00000625926 PGK1P00558 417 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 MAGEA10P43363 369 aaPredicted RBP12.73□□□□□ -0.37
SSBP4-215ENST00000625926 CNTN2Q02246 1040 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 ARMCX2Q7L311 632 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 CCDC144CPQ8IYA2 1237 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 ANKS1AQ92625 1134 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 FGD4Q96M96 766 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
SSBP4-215ENST00000625926 KRT23Q9C075 422 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 CNNM2Q9H8M5 875 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 PNMA2Q9UL42 364 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
SSBP4-215ENST00000625926 RLFQ13129 1914 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 RAD50Q92878 1312 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 ASB14A6NK59 587 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 B4E1Z4 1266 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 CHMLP26374 656 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 RTP1P59025 263 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
SSBP4-215ENST00000625926 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 IL25Q9H293 177 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 ZSWIM5Q9P217 1185 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 ATP11BQ9Y2G3 1177 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 CEP290O15078 2479 aa12.72□□□□□ -0.37
SSBP4-215ENST00000625926 DOCK3Q8IZD9 2030 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 SOWAHBA6NEL2 793 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
SSBP4-215ENST00000625926 SNX17Q15036 470 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 C1orf53Q5VUE5 145 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 PNMA1Q8ND90 353 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 LENG1Q96BZ8 264 aaPredicted RBP12.71□□□□□ -0.37
SSBP4-215ENST00000625926 LBHD1Q9BQE6 289 aaPredicted RBP12.71□□□□□ -0.37
SSBP4-215ENST00000625926 TSEN34Q9BSV6 310 aaKnown RBP12.71□□□□□ -0.37
SSBP4-215ENST00000625926 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
SSBP4-215ENST00000625926 SPC25Q9HBM1 224 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 CYP39A1Q9NYL5 469 aa12.71□□□□□ -0.37
SSBP4-215ENST00000625926 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
SSBP4-215ENST00000625926 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
SSBP4-215ENST00000625926 KLHDC9Q8NEP7 349 aa12.7□□□□□ -0.38
SSBP4-215ENST00000625926 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
SSBP4-215ENST00000625926 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms