RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 CARNS1A5YM72 827 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 AMPD2Q01433 879 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 APOBRQ0VD83 1088 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 SYDE2Q5VT97 1194 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 CCDC84Q86UT8 332 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 TTLL3Q9Y4R7 772 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 POLR3GO15318 223 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 URI1O94763 535 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 LRRC4Q9HBW1 653 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 ARAP3Q8WWN8 1544 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 ITKQ08881 620 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 PTGDRQ13258 359 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 C4orf50Q6ZRC1 276 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 TMC6Q7Z403 805 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 RNF8O76064 485 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 RARBP10826 455 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
VPS8-227ENST00000625842 HINFPQ9BQA5 517 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 SLF1Q9BQI6 1058 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
VPS8-227ENST00000625842 KDRP35968 1356 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 ATP5DP30049 168 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 PDXDC2PQ6P474 469 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 RNF207Q6ZRF8 634 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 MAATS1Q7Z4T9 603 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 NEK8Q86SG6 692 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 CABP7Q86V35 215 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
VPS8-227ENST00000625842 PGBD4Q96DM1 585 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 SUCLG2Q96I99 432 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 GLT1D1Q96MS3 346 aa12.21□□□□□ -0.45
VPS8-227ENST00000625842 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
VPS8-227ENST00000625842 HERC5Q9UII4 1024 aaKnown RBP12.21□□□□□ -0.45
VPS8-227ENST00000625842 SRPRBQ9Y5M8 271 aaKnown RBP12.21□□□□□ -0.45
VPS8-227ENST00000625842 ELP1O95163 1332 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 DYNC1I1O14576 645 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 EIF3DO15371 548 aaKnown RBP eCLIP12.21□□□□□ -0.46
VPS8-227ENST00000625842 TGFB2P61812 414 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 UBXN1Q04323 297 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 KRT17Q04695 432 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 LRCH2Q5VUJ6 765 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.46
VPS8-227ENST00000625842 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 DYRK4Q9NR20 520 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
VPS8-227ENST00000625842 K7ENM7 598 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 OPA1O60313 960 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 MOCS3O95396 460 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 S100BP04271 92 aaPredicted RBP12.2□□□□□ -0.46
VPS8-227ENST00000625842 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 KRT81Q14533 505 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 SLC15A2Q16348 729 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
VPS8-227ENST00000625842 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 HSPD1P10809 573 aaKnown RBP12.2□□□□□ -0.46
VPS8-227ENST00000625842 PHKA2P46019 1235 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 GTF2A2P52657 109 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 TKFCQ3LXA3 575 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 CROCCP2Q86T23 111 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
VPS8-227ENST00000625842 TRIM62Q9BVG3 475 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 IVLP07476 585 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 PDE6AP16499 860 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 GAP43P17677 238 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 ALCAMQ13740 583 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 KYAT1Q16773 422 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
VPS8-227ENST00000625842 KCNQ2O43526 872 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 STAM2O75886 525 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 ZNF18P17022 549 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 JAK3P52333 1124 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 SLFN12LQ6IEE8 588 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 ATP2A3Q93084 1043 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 SLC7A5P2Q9GIP4 190 aa12.2□□□□□ -0.46
VPS8-227ENST00000625842 CRKP46108 304 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 CNGA4Q8IV77 575 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
VPS8-227ENST00000625842 WDR46O15213 610 aaKnown RBP12.19□□□□□ -0.46
VPS8-227ENST00000625842 MXRA7P84157 204 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 ASIC2Q16515 512 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
VPS8-227ENST00000625842 FBF1Q8TES7 1133 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 A6NJR5 290 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 HNRNPDLO14979 420 aaKnown RBP12.19□□□□□ -0.46
VPS8-227ENST00000625842 TWF2Q6IBS0 349 aaKnown RBP12.19□□□□□ -0.46
VPS8-227ENST00000625842 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 ZNF654Q8IZM8 581 aa12.19□□□□□ -0.46
VPS8-227ENST00000625842 TTC39CQ8N584 583 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms