RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 HACL1Q9UJ83 578 aa13.39□□□□□ -0.27
CCDC163-201ENST00000625766 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
CCDC163-201ENST00000625766 LAD1O00515 517 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
CCDC163-201ENST00000625766 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC163-201ENST00000625766 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
CCDC163-201ENST00000625766 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
CCDC163-201ENST00000625766 RNF214Q8ND24 703 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 SH2D4AQ9H788 454 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CCDC163-201ENST00000625766 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
CCDC163-201ENST00000625766 ECE1P42892 770 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 ADCY7P51828 1080 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 MDM2Q00987 491 aaPredicted RBP13.37□□□□□ -0.27
CCDC163-201ENST00000625766 INF2Q27J81 1249 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
CCDC163-201ENST00000625766 MCM7P33993 719 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 PRPHP41219 470 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 SYDE2Q5VT97 1194 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 TUBE1Q9UJT0 475 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 LONP1P36776 959 aaKnown RBP13.36□□□□□ -0.27
CCDC163-201ENST00000625766 TRAF1Q13077 416 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 IL17AQ16552 155 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 MCTP2Q6DN12 878 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 NEK8Q86SG6 692 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 APOBEC3FQ8IUX4 373 aaKnown RBP13.36□□□□□ -0.27
CCDC163-201ENST00000625766 CUL5Q93034 780 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
CCDC163-201ENST00000625766 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
CCDC163-201ENST00000625766 RAD21O60216 631 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 CDC37Q16543 378 aaPredicted RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 STX1AQ16623 288 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 ANO6Q4KMQ2 910 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 USP49Q70CQ1 688 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 NUP88Q99567 741 aaPredicted RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 PYM1Q9BRP8 204 aaKnown RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 ASTN2O75129 1339 aaPredicted RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 POLR2DO15514 142 aaKnown RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
CCDC163-201ENST00000625766 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
CCDC163-201ENST00000625766 VWA3AA6NCI4 1184 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 EDIL3O43854 480 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 ZNF165P49910 485 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 STAT2P52630 851 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 HIRAP54198 1017 aaPredicted RBP13.34□□□□□ -0.27
CCDC163-201ENST00000625766 ANGEL2Q5VTE6 544 aaKnown RBP13.34□□□□□ -0.27
CCDC163-201ENST00000625766 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
CCDC163-201ENST00000625766 EPSTI1Q96J88 318 aa13.34□□□□□ -0.27
CCDC163-201ENST00000625766 EPS15P42566 896 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 NT5DC1Q5TFE4 455 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 PPP4R3AQ6IN85 833 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 SPICE1Q8N0Z3 855 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 TRPM4Q8TD43 1214 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 ZNF341Q9BYN7 854 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 KIAA1683Q9H0B3 1180 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 CBX8Q9HC52 389 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 TMEM260Q9NX78 707 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 FEM1BQ9UK73 627 aa13.33□□□□□ -0.27
CCDC163-201ENST00000625766 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.27
CCDC163-201ENST00000625766 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
CCDC163-201ENST00000625766 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
CCDC163-201ENST00000625766 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.28
CCDC163-201ENST00000625766 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.28
CCDC163-201ENST00000625766 IQCB1Q15051 598 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 LETM2Q2VYF4 491 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 SPATA20Q8TB22 786 aa13.33□□□□□ -0.28
CCDC163-201ENST00000625766 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms