RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PGK2P07205 417 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 HAND2P61296 217 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 NECTIN1Q15223 517 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 TKFCQ3LXA3 575 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 CCDC178Q5BJE1 867 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
PNKP-217ENST00000625216 ESR2Q92731 530 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 KCNB2Q92953 911 aa14.83□□□□□ -0.04
PNKP-217ENST00000625216 COLQQ9Y215 455 aaPredicted RBP14.83□□□□□ -0.04
PNKP-217ENST00000625216 CEP290O15078 2479 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 DNAJC25-GNG10A0A024R161 153 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 DNM1LO00429 736 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 SLC27A2O14975 620 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 SLC4A3P48751 1232 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 CREB3L3Q68CJ9 461 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 KCTD1Q719H9 257 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 ANKRD35Q8N283 1001 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 TMEM47Q9BQJ4 181 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 SNX14Q9Y5W7 946 aa14.82□□□□□ -0.04
PNKP-217ENST00000625216 ANAPC15P60006 121 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 IMMTQ16891 758 aaKnown RBP14.81□□□□□ -0.04
PNKP-217ENST00000625216 PRAMEF19Q5SWL8 479 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 MAMDC4Q6UXC1 1216 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 BTNL9Q6UXG8 535 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 DGKHQ86XP1 1220 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 TBC1D10CQ8IV04 446 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 PNMA2Q9UL42 364 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 PRR12Q9ULL5 1215 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 TAF6LQ9Y6J9 622 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
PNKP-217ENST00000625216 PFASO15067 1338 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 SYNGAP1Q96PV0 1343 aa14.81□□□□□ -0.04
PNKP-217ENST00000625216 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
PNKP-217ENST00000625216 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
PNKP-217ENST00000625216 IQCA1Q86XH1 822 aa14.8□□□□□ -0.04
PNKP-217ENST00000625216 ACAD9Q9H845 621 aa14.8□□□□□ -0.04
PNKP-217ENST00000625216 ZNF536O15090 1300 aa14.8□□□□□ -0.04
PNKP-217ENST00000625216 KBTBD13C9JR72 458 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 RARBP10826 455 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 RABEP1Q15276 862 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 C7orf61Q8IZ16 206 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 ANKS1AQ92625 1134 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 AGBL1Q96MI9 1066 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 TRERF1Q96PN7 1200 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 KRT23Q9C075 422 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 SENP6Q9GZR1 1112 aaPredicted RBP14.79□□□□□ -0.04
PNKP-217ENST00000625216 PRO3102Q9H379 93 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 CNNM2Q9H8M5 875 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
PNKP-217ENST00000625216 PARP14Q460N5 1801 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 A0A1W2PPC1 479 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 ICAM1P05362 532 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 CYP21A2P08686 494 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 ZNF865P0CJ78 1059 aaPredicted RBP14.78□□□□□ -0.04
PNKP-217ENST00000625216 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 PDHBP11177 359 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 AKR1A1P14550 325 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 ADCK5Q3MIX3 580 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 SYDE2Q5VT97 1194 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 RANBP17Q9H2T7 1088 aaKnown RBP14.78□□□□□ -0.04
PNKP-217ENST00000625216 RNF146Q9NTX7 359 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 FAM184BQ9ULE4 1060 aa14.78□□□□□ -0.04
PNKP-217ENST00000625216 NEDD4P46934 1319 aa14.77□□□□□ -0.04
PNKP-217ENST00000625216 KDM4AO75164 1064 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.05
PNKP-217ENST00000625216 SNAI1O95863 264 aaPredicted RBP14.77□□□□□ -0.05
PNKP-217ENST00000625216 ALAS1P13196 640 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 ZNF543Q08ER8 600 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 LRRC41Q15345 812 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 GPATCH4Q5T3I0 446 aaKnown RBP14.77□□□□□ -0.05
PNKP-217ENST00000625216 GJC2Q5T442 439 aaPredicted RBP14.77□□□□□ -0.05
PNKP-217ENST00000625216 ANO1Q5XXA6 986 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 CCDC174Q6PII3 467 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 RNF180Q86T96 592 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 CHMP4CQ96CF2 233 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 ABHD16BQ9H3Z7 469 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 XPNPEP3Q9NQH7 507 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 HOMER2Q9NSB8 354 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 ZSWIM5Q9P217 1185 aa14.77□□□□□ -0.05
PNKP-217ENST00000625216 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
PNKP-217ENST00000625216 MYH4Q9Y623 1939 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 TAL1P17542 331 aaPredicted RBP14.76□□□□□ -0.05
PNKP-217ENST00000625216 BMP8BP34820 402 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 SLC16A2P36021 539 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 COL9A3Q14050 684 aaPredicted RBP14.76□□□□□ -0.05
PNKP-217ENST00000625216 RNF20Q5VTR2 975 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 TTBK2Q6IQ55 1244 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 STOX1Q6ZVD7 989 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 FAM133AQ8N9E0 248 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 IPO9Q96P70 1041 aaKnown RBP14.76□□□□□ -0.05
PNKP-217ENST00000625216 ZSCAN10Q96SZ4 725 aaPredicted RBP14.76□□□□□ -0.05
PNKP-217ENST00000625216 GDF15Q99988 308 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 GPCPD1Q9NPB8 672 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 A1CFQ9NQ94 594 aaKnown RBP14.76□□□□□ -0.05
PNKP-217ENST00000625216 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms