RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 TMX2Q9Y320 296 aa17.68■□□□□ 0.42
RPL13A-214ENST00000624069 MYH4Q9Y623 1939 aa17.68■□□□□ 0.42
RPL13A-214ENST00000624069 RLFQ13129 1914 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 B4E1Z4 1266 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 KIAA0355O15063 1070 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 VCAM1P19320 739 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
RPL13A-214ENST00000624069 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 RALYLQ86SE5 291 aaKnown RBP17.67■□□□□ 0.42
RPL13A-214ENST00000624069 DPP9Q86TI2 863 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 SIAH1Q8IUQ4 282 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 ADAMTS19Q8TE59 1207 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 STX8Q9UNK0 236 aa17.67■□□□□ 0.42
RPL13A-214ENST00000624069 SPDYE16A6NNV3 312 aaPredicted RBP17.66■□□□□ 0.42
RPL13A-214ENST00000624069 SLC27A2O14975 620 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 RAD21O60216 631 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 KDM4AO75164 1064 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 CLTBP09497 229 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 ADORA2AP29274 412 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 PRAMEF19Q5SWL8 479 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 CREB3L3Q68CJ9 461 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 IQCA1Q86XH1 822 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 SYNPO2Q9UMS6 1093 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 NCOR1O75376 2440 aa17.66■□□□□ 0.42
RPL13A-214ENST00000624069 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 E7EWF7 191 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 STRNO43815 780 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 NMT2O60551 498 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 COBLO75128 1261 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 RAG1P15918 1043 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 FPGSQ05932 587 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 LRRC47Q8N1G4 583 aaKnown RBP17.65■□□□□ 0.42
RPL13A-214ENST00000624069 MOV10L1Q9BXT6 1211 aaKnown RBP17.65■□□□□ 0.42
RPL13A-214ENST00000624069 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 THEGQ9P2T0 379 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
RPL13A-214ENST00000624069 WDR46O15213 610 aaKnown RBP17.64■□□□□ 0.41
RPL13A-214ENST00000624069 MRPS5P82675 430 aaKnown RBP17.64■□□□□ 0.41
RPL13A-214ENST00000624069 NECTIN1Q15223 517 aa17.64■□□□□ 0.41
RPL13A-214ENST00000624069 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
RPL13A-214ENST00000624069 SPICE1Q8N0Z3 855 aa17.64■□□□□ 0.41
RPL13A-214ENST00000624069 NCOA7Q8NI08 942 aa17.64■□□□□ 0.41
RPL13A-214ENST00000624069 UHRF1Q96T88 793 aaPredicted RBP17.64■□□□□ 0.41
RPL13A-214ENST00000624069 UBAC1Q9BSL1 405 aa17.64■□□□□ 0.41
RPL13A-214ENST00000624069 TANGO6Q9C0B7 1094 aa17.64■□□□□ 0.41
RPL13A-214ENST00000624069 RPAP3Q9H6T3 665 aaPredicted RBP17.64■□□□□ 0.41
RPL13A-214ENST00000624069 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
RPL13A-214ENST00000624069 MKL1Q969V6 931 aa17.63■□□□□ 0.41
RPL13A-214ENST00000624069 GAS2L1Q99501 681 aaPredicted RBP17.63■□□□□ 0.41
RPL13A-214ENST00000624069 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
RPL13A-214ENST00000624069 EPB41L2O43491 1005 aaKnown RBP17.62■□□□□ 0.41
RPL13A-214ENST00000624069 EIF5BO60841 1220 aaKnown RBP17.62■□□□□ 0.41
RPL13A-214ENST00000624069 NDUFB10O96000 172 aa17.62■□□□□ 0.41
RPL13A-214ENST00000624069 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
RPL13A-214ENST00000624069 GMCL1P1Q8NEA9 526 aa17.62■□□□□ 0.41
RPL13A-214ENST00000624069 ZSCAN10Q96SZ4 725 aaPredicted RBP17.62■□□□□ 0.41
RPL13A-214ENST00000624069 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
RPL13A-214ENST00000624069 TMEM39AQ9NV64 488 aa17.62■□□□□ 0.41
RPL13A-214ENST00000624069 ZSWIM5Q9P217 1185 aa17.62■□□□□ 0.41
RPL13A-214ENST00000624069 F5H6K3 240 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
RPL13A-214ENST00000624069 ERCC3P19447 782 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 NOVP48745 357 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 KLRC3Q07444 240 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 ADGRE1Q14246 886 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 SHCBP1Q8NEM2 672 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.61■□□□□ 0.411e-16■■□□□ 14.4
RPL13A-214ENST00000624069 ISY1Q9ULR0 285 aaKnown RBP17.61■□□□□ 0.41
RPL13A-214ENST00000624069 TNKSO95271 1327 aa17.61■□□□□ 0.41
RPL13A-214ENST00000624069 PQBP1O60828 265 aaKnown RBP17.6■□□□□ 0.41
RPL13A-214ENST00000624069 MCCP23508 829 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 PBX2P40425 430 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 FAAP100Q0VG06 881 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 KRT32Q14532 448 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 COG2Q14746 738 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 SART3Q15020 963 aaKnown RBP17.6■□□□□ 0.41
RPL13A-214ENST00000624069 FAM83BQ5T0W9 1011 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 CYB5R4Q7L1T6 521 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 C16orf59Q7L2K0 433 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 MB21D2Q8IYB1 491 aaPredicted RBP17.6■□□□□ 0.41
RPL13A-214ENST00000624069 MAML3Q96JK9 1138 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 TTC14Q96N46 770 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 TOX2Q96NM4 488 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 TMEM47Q9BQJ4 181 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 PBX4Q9BYU1 374 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 SPATC1LQ9H0A9 340 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 XPNPEP3Q9NQH7 507 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 SLC5A4Q9NY91 659 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
RPL13A-214ENST00000624069 ERICH2A1L162 156 aa17.59■□□□□ 0.41
RPL13A-214ENST00000624069 GRXCR1A8MXD5 290 aa17.59■□□□□ 0.41
RPL13A-214ENST00000624069 FLOT1O75955 427 aa17.59■□□□□ 0.41
RPL13A-214ENST00000624069 HSPA4P34932 840 aa17.59■□□□□ 0.41
RPL13A-214ENST00000624069 CCDC85BQ15834 202 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms