RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ZHX1Q9UKY1 873 aaPredicted RBP15.37■□□□□ 0.05
ATRX-208ENST00000622960 RIPK3Q9Y572 518 aa15.37■□□□□ 0.05
ATRX-208ENST00000622960 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 GJC2Q5T442 439 aaPredicted RBP15.36■□□□□ 0.05
ATRX-208ENST00000622960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATRX-208ENST00000622960 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 TMEM47Q9BQJ4 181 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 KRT23Q9C075 422 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
ATRX-208ENST00000622960 FAM184BQ9ULE4 1060 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 CCPG1Q9ULG6 757 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 PRR12Q9ULL5 1215 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
ATRX-208ENST00000622960 ALPK3Q96L96 1907 aa15.36■□□□□ 0.05
ATRX-208ENST00000622960 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 IGHA2P01877 340 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 SYDE2Q5VT97 1194 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 TBC1D10CQ8IV04 446 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 LBHD1Q9BQE6 289 aaPredicted RBP15.35■□□□□ 0.05
ATRX-208ENST00000622960 UBAC1Q9BSL1 405 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 NEDD4P46934 1319 aa15.35■□□□□ 0.05
ATRX-208ENST00000622960 DNAJC25-GNG10A0A024R161 153 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 ICAM1P05362 532 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 SYN1P17600 705 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 NOVP48745 357 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 ATN1P54259 1190 aaPredicted RBP15.34■□□□□ 0.05
ATRX-208ENST00000622960 TRDNQ13061 729 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 LRRC26Q2I0M4 334 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 GPATCH4Q5T3I0 446 aaKnown RBP15.34■□□□□ 0.05
ATRX-208ENST00000622960 MAMDC4Q6UXC1 1216 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 DGKHQ86XP1 1220 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 AGBL1Q96MI9 1066 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
ATRX-208ENST00000622960 ABHD16BQ9H3Z7 469 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 GPCPD1Q9NPB8 672 aa15.34■□□□□ 0.05
ATRX-208ENST00000622960 FRMPD2Q68DX3 1309 aaPredicted RBP15.34■□□□□ 0.05
ATRX-208ENST00000622960 ASB14A6NK59 587 aa15.33■□□□□ 0.04
ATRX-208ENST00000622960 KDM4AO75164 1064 aa15.33■□□□□ 0.04
ATRX-208ENST00000622960 LRRC41Q15345 812 aa15.33■□□□□ 0.04
ATRX-208ENST00000622960 NSMFQ6X4W1 530 aa15.33■□□□□ 0.04
ATRX-208ENST00000622960 ZKSCAN3Q9BRR0 538 aa15.33■□□□□ 0.04
ATRX-208ENST00000622960 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.33■□□□□ 0.04
ATRX-208ENST00000622960 ATP11BQ9Y2G3 1177 aa15.33■□□□□ 0.04
ATRX-208ENST00000622960 B4E1Z4 1266 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 PDHBP11177 359 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 PDE4AP27815 886 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 SLC16A2P36021 539 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 FXR1P51114 621 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATRX-208ENST00000622960 RTP1P59025 263 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 ACVR2BQ13705 512 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 ARMCX2Q7L311 632 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 RANBP17Q9H2T7 1088 aaKnown RBP15.32■□□□□ 0.04
ATRX-208ENST00000622960 A1CFQ9NQ94 594 aaKnown RBP15.32■□□□□ 0.04
ATRX-208ENST00000622960 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 ZNF536O15090 1300 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 CEP290O15078 2479 aa15.32■□□□□ 0.04
ATRX-208ENST00000622960 DHX16O60231 1041 aaKnown RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 PGK1P00558 417 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 ZNF865P0CJ78 1059 aaPredicted RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 GSPT1P15170 499 aaKnown RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 TAL1P17542 331 aaPredicted RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 BMP8BP34820 402 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 ADCYAP1R1P41586 468 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 SNAP25P60880 206 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 ZNF543Q08ER8 600 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 BTNL9Q6UXG8 535 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 SLC39A5Q6ZMH5 540 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 RASGRP2Q7LDG7 609 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 NUP133Q8WUM0 1156 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 FERMT2Q96AC1 680 aa15.31■□□□□ 0.04
ATRX-208ENST00000622960 ZSCAN10Q96SZ4 725 aaPredicted RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 UBE2OQ9C0C9 1292 aaKnown RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 PRDM5Q9NQX1 630 aaPredicted RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 ADD3Q9UEY8 706 aaKnown RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
ATRX-208ENST00000622960 ERICH2A1L162 156 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 PTPDC1A2A3K4 754 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 B4DLN1 442 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
ATRX-208ENST00000622960 TNKSO95271 1327 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
ATRX-208ENST00000622960 MRPL12P52815 198 aaKnown RBP15.3■□□□□ 0.04
ATRX-208ENST00000622960 SART3Q15020 963 aaKnown RBP15.3■□□□□ 0.04
ATRX-208ENST00000622960 ASPRV1Q53RT3 343 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 PCSK9Q8NBP7 692 aaKnown RBP15.3■□□□□ 0.04
ATRX-208ENST00000622960 TSEN34Q9BSV6 310 aaKnown RBP15.3■□□□□ 0.04
ATRX-208ENST00000622960 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 PHF24Q9UPV7 400 aa15.3■□□□□ 0.04
ATRX-208ENST00000622960 MOXD2PA6NHM9 499 aa15.29■□□□□ 0.04
ATRX-208ENST00000622960 SNAI1O95863 264 aaPredicted RBP15.29■□□□□ 0.04
ATRX-208ENST00000622960 C6orf222P0C671 652 aaPredicted RBP15.29■□□□□ 0.04
ATRX-208ENST00000622960 CNTN2Q02246 1040 aa15.29■□□□□ 0.04
ATRX-208ENST00000622960 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
ATRX-208ENST00000622960 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms