RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ZNF365Q70YC5 407 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 B4GALNT4Q76KP1 1039 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 FMNL3Q8IVF7 1028 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 NKIRAS1Q9NYS0 192 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 PPFIA1Q13136 1202 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 PAXIP1Q6ZW49 1069 aaPredicted RBP17.83■□□□□ 0.45
GABRB3-215ENST00000622697 ARMCX3Q9UH62 379 aaPredicted RBP17.83■□□□□ 0.45
GABRB3-215ENST00000622697 USP21Q9UK80 565 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 KIAA1024Q9UPX6 916 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 COMMD10Q9Y6G5 202 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 CYP2E1P05181 493 aaPredicted RBP17.83■□□□□ 0.44
GABRB3-215ENST00000622697 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 KRT71Q3SY84 523 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 SRGAP1Q7Z6B7 1085 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 STRBPQ96SI9 672 aaKnown RBP17.83■□□□□ 0.44
GABRB3-215ENST00000622697 NEDD4P46934 1319 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 SLC16A2P36021 539 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 LARGE2Q8N3Y3 721 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 TSNARE1Q96NA8 513 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 E9PCH4 1651 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 DIXDC1Q155Q3 683 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 FAM26FQ5R3K3 315 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 ZNF354CQ86Y25 554 aa17.83■□□□□ 0.44
GABRB3-215ENST00000622697 STAMBPO95630 424 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 USP17L3A6NCW0 530 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 USP17L4A6NCW7 530 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 H0YIN7 160 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 USP17L1Q7RTZ2 530 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 PAGE5Q96GU1 130 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 THRAP3Q9Y2W1 955 aaKnown RBP17.82■□□□□ 0.44
GABRB3-215ENST00000622697 STAT1P42224 750 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 NAA30Q147X3 362 aaPredicted RBP17.82■□□□□ 0.44
GABRB3-215ENST00000622697 USP17L2Q6R6M4 530 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 GJA10Q969M2 543 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 DPH5Q9H2P9 285 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 KDM3AQ9Y4C1 1321 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 SRPRBQ9Y5M8 271 aaKnown RBP17.82■□□□□ 0.44
GABRB3-215ENST00000622697 TMEM232C9JQI7 657 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 BCRP11274 1271 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 GNGT1P63211 74 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 CEP85LQ5SZL2 805 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 NPHP4O75161 1426 aaPredicted RBP17.82■□□□□ 0.44
GABRB3-215ENST00000622697 EHHADHQ08426 723 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 NAA35Q5VZE5 725 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 COA7Q96BR5 231 aa17.82■□□□□ 0.44
GABRB3-215ENST00000622697 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
GABRB3-215ENST00000622697 NUCKS1Q9H1E3 243 aaKnown RBP17.82■□□□□ 0.44
GABRB3-215ENST00000622697 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 CXCR5P32302 372 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 PIGSQ96S52 555 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 MAK16Q9BXY0 300 aaKnown RBP17.81■□□□□ 0.44
GABRB3-215ENST00000622697 LAMC1P11047 1609 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 KRIT1O00522 736 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 GNA14O95837 355 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 UHMK1Q8TAS1 419 aaKnown RBP17.81■□□□□ 0.44
GABRB3-215ENST00000622697 MGARPQ8TDB4 240 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 TBCKQ8TEA7 893 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 SPTLC3Q9NUV7 552 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 PCDHA1Q9Y5I3 950 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 STRN3Q13033 797 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 SYCE1Q8N0S2 351 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 SPICE1Q8N0Z3 855 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 AMFRQ9UKV5 643 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 CTNNA1P35221 906 aaKnown RBP17.81■□□□□ 0.44
GABRB3-215ENST00000622697 CERKLQ49MI3 558 aaPredicted RBP17.81■□□□□ 0.44
GABRB3-215ENST00000622697 RUFY4Q6ZNE9 571 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 ENOX1Q8TC92 643 aaKnown RBP17.81■□□□□ 0.44
GABRB3-215ENST00000622697 RPGRIP1Q96KN7 1286 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 IL25Q9H293 177 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 GINS2Q9Y248 185 aa17.81■□□□□ 0.44
GABRB3-215ENST00000622697 UBXN2AP68543 259 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.44
GABRB3-215ENST00000622697 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 CABS1Q96KC9 395 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 EXOC7Q9UPT5 735 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 USP27XA6NNY8 438 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 SETDB1Q15047 1291 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 KCTD16Q68DU8 428 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 LIFRP42702 1097 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 ZNF658Q5TYW1 1059 aaPredicted RBP17.8■□□□□ 0.44
GABRB3-215ENST00000622697 GALNT17Q6IS24 598 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
GABRB3-215ENST00000622697 MECOMQ03112 1051 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 PABPC4Q13310 644 aaKnown RBP eCLIP17.8■□□□□ 0.44
GABRB3-215ENST00000622697 TBC1D10BQ4KMP7 808 aaPredicted RBP17.8■□□□□ 0.44
GABRB3-215ENST00000622697 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
GABRB3-215ENST00000622697 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 CLCN6P51797 869 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 KSR1Q8IVT5 923 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 CLEC17AQ6ZS10 378 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 P2RX5Q93086 422 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 CDC27P30260 824 aa17.79■□□□□ 0.44
GABRB3-215ENST00000622697 SMCR8Q8TEV9 937 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms