RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 HDAC7Q8WUI4 952 aa14.57□□□□□ -0.08
CHD1L-210ENST00000622533 GNL3LQ9NVN8 582 aaKnown RBP14.57□□□□□ -0.08
CHD1L-210ENST00000622533 TAB2Q9NYJ8 693 aa14.57□□□□□ -0.08
CHD1L-210ENST00000622533 ZBTB1Q9Y2K1 713 aa14.57□□□□□ -0.08
CHD1L-210ENST00000622533 EPN1Q9Y6I3 576 aaPredicted RBP14.57□□□□□ -0.08
CHD1L-210ENST00000622533 DISP2A7MBM2 1401 aa14.57□□□□□ -0.08
CHD1L-210ENST00000622533 MINDY4BA8MYZ0 360 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 ZEB2O60315 1214 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
CHD1L-210ENST00000622533 PPARDQ03181 441 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 SEMA3FQ13275 785 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 KRT31Q15323 416 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 KCTD16Q68DU8 428 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 SH2D3CQ8N5H7 860 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 JAKMIP2Q96AA8 810 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 BCL9O00512 1426 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 KIF1CO43896 1103 aaKnown RBP14.56□□□□□ -0.08
CHD1L-210ENST00000622533 NDUFA10O95299 355 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 COPB1P53618 953 aaKnown RBP14.56□□□□□ -0.08
CHD1L-210ENST00000622533 CCDC122Q5T0U0 273 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 RRAGBQ5VZM2 374 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 ENAHQ8N8S7 591 aaPredicted RBP14.56□□□□□ -0.08
CHD1L-210ENST00000622533 MIGA1Q8NAN2 632 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 TNFRSF25Q93038 417 aa14.56□□□□□ -0.08
CHD1L-210ENST00000622533 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.56□□□□□ -0.08
CHD1L-210ENST00000622533 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 BCAMP50895 628 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ZNF658Q5TYW1 1059 aaPredicted RBP14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ZNF622Q969S3 477 aaKnown RBP eCLIP14.55□□□□□ -0.086e-8■□□□□ 11.2
CHD1L-210ENST00000622533 BRIP1Q9BX63 1249 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 CENPHQ9H3R5 247 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 V9GY48 417 aaPredicted RBP14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ITGB4P16144 1822 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 A0A0G2JS52 829 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 TARSL2A2RTX5 802 aaKnown RBP14.55□□□□□ -0.08
CHD1L-210ENST00000622533 SLC7A5Q01650 507 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 PARP10Q53GL7 1025 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 TCP11X2Q5H9J9 407 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ABCA3Q99758 1704 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 H7C1D1 291 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 PSMD14O00487 310 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.083e-7■■■■■ 27.4
CHD1L-210ENST00000622533 PTGDRQ13258 359 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ZNF174Q15697 407 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 TTMPQ5BVD1 217 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 ARL6IP4Q66PJ3 421 aaKnown RBP14.55□□□□□ -0.08
CHD1L-210ENST00000622533 TMTC3Q6ZXV5 915 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
CHD1L-210ENST00000622533 DUOX1Q9NRD9 1551 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 FAM205CA6NFA0 338 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 KCNJ18B7U540 433 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 FGRP09769 529 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 HERVK_113P62684 666 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 ACTN3Q08043 901 aaPredicted RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 KCNJ12Q14500 433 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 RNF187Q5TA31 235 aaPredicted RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 AENQ8WTP8 325 aaKnown RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 XDHP47989 1333 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 LONP1P36776 959 aaKnown RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 EARS2Q5JPH6 523 aaKnown RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 PDXDC2PQ6P474 469 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 TSEN2Q8NCE0 465 aaKnown RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 DMGDHQ9UI17 866 aaKnown RBP14.54□□□□□ -0.08
CHD1L-210ENST00000622533 FAM184BQ9ULE4 1060 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 DUSP10Q9Y6W6 482 aa14.54□□□□□ -0.08
CHD1L-210ENST00000622533 TROAPQ12815 778 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 EHBP1Q8NDI1 1231 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 NELFBQ8WX92 580 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 N4BP2L2Q92802 583 aaPredicted RBP14.53□□□□□ -0.08
CHD1L-210ENST00000622533 HAUS4Q9H6D7 363 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 JADE2Q9NQC1 790 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 KCNG1Q9UIX4 513 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 A0A1W2PQC6 194 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 PES1O00541 588 aaKnown RBP14.53□□□□□ -0.08
CHD1L-210ENST00000622533 MEFVO15553 781 aaPredicted RBP14.53□□□□□ -0.08
CHD1L-210ENST00000622533 MYL1P05976 194 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 RDXP35241 583 aaKnown RBP14.53□□□□□ -0.08
CHD1L-210ENST00000622533 PAPD7Q5XG87 772 aaKnown RBP14.53□□□□□ -0.08
CHD1L-210ENST00000622533 RPGRIP1Q96KN7 1286 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 DLEC1Q9Y238 1755 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 MYH2Q9UKX2 1941 aa14.53□□□□□ -0.08
CHD1L-210ENST00000622533 CCDC189A1A4V9 331 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 RCCD1A6NED2 376 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 PRDM1O75626 825 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 CALML3P27482 149 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 RPAINQ86UA6 219 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 SDR42E1Q8WUS8 393 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 LRRC1Q9BTT6 524 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 MAPK8IP1Q9UQF2 711 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.08
CHD1L-210ENST00000622533 RPN1P04843 607 aaKnown RBP14.52□□□□□ -0.09
CHD1L-210ENST00000622533 SUSD4Q5VX71 490 aa14.52□□□□□ -0.09
CHD1L-210ENST00000622533 ZNF662Q6ZS27 426 aa14.52□□□□□ -0.09
CHD1L-210ENST00000622533 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.09
CHD1L-210ENST00000622533 KIAA1328Q86T90 577 aa14.52□□□□□ -0.09
CHD1L-210ENST00000622533 OR8K1Q8NGG5 319 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms