RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CYTH2Q99418 400 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 IFNB1P01574 187 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 ZFXP17010 805 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 CNGA1P29973 690 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 PPP1R2P41236 205 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 DYMQ7RTS9 669 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 DRC3Q9H069 523 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 MYO1CO00159 1063 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 SAT1P21673 171 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 TFCP2Q12800 502 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 ARHGAP44Q17R89 818 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 KRT80Q6KB66 452 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 DCLK2Q8N568 766 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 DCPSQ96C86 337 aaKnown RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 BAG5Q9UL15 447 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 ZC3H18Q86VM9 953 aaKnown RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 POC1B-GALNT4F8VUJ3 575 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 EVI5O60447 810 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 MAGEA9P43362 315 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 NELFCDQ8IXH7 590 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 CNPY4Q8N129 248 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 LSM14BQ9BX40 385 aaKnown RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 ESYT2A0FGR8 921 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 CUTAO60888 179 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 HNRNPCP07910 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 HP1BP3Q5SSJ5 553 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 MAEAQ7L5Y9 396 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 PLBD2Q8NHP8 589 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 UIMC1Q96RL1 719 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 CACYBPQ9HB71 228 aaKnown RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 KRT82Q9NSB4 513 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 GNPTABQ3T906 1256 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 TMEM259Q4ZIN3 620 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 NAA35Q5VZE5 725 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 GADL1Q6ZQY3 521 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 GABPB2Q8TAK5 448 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 CCDC169A6NNP5 214 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 GNGT2O14610 69 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 CSPG5O95196 566 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 GSTA1P08263 222 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 GSTA2P09210 222 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 ETF1P62495 437 aaKnown RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 IL9RQ01113 521 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 PARP10Q53GL7 1025 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 TBC1D1Q86TI0 1168 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-210ENST00000621266 TRIML2Q8N7C3 387 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 FAM167BQ9BTA0 163 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 ENC1O14682 589 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 ALDH1B1P30837 517 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 SUPT20HQ8NEM7 779 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 PTPN22Q9Y2R2 807 aa10.83□□□□□ -0.68
COL4A6-210ENST00000621266 DNAJC6O75061 913 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 PMS1P54277 932 aaKnown RBP10.82□□□□□ -0.68
COL4A6-210ENST00000621266 GDAP1Q8TB36 358 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 NRBP1Q9UHY1 535 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 GNA11P29992 359 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 GOLGA8FQ08AF8 430 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 GOLGA8DPQ0D2H9 430 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 ZNF449Q6P9G9 518 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 SEPT12Q8IYM1 358 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 ACTR5Q9H9F9 607 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-210ENST00000621266 LGR6Q9HBX8 967 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 ITGA6P23229 1130 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 SPOUT1Q5T280 376 aaKnown RBP10.82□□□□□ -0.68
COL4A6-210ENST00000621266 ANGPTL2Q9UKU9 493 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 ACTN3Q08043 901 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-210ENST00000621266 TRMT10CQ7L0Y3 403 aaKnown RBP10.82□□□□□ -0.68
COL4A6-210ENST00000621266 MAIP1Q8WWC4 291 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 RABGGTAQ92696 567 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 SORBS3O60504 671 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 TXKP42681 527 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 MSH2P43246 934 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
COL4A6-210ENST00000621266 ARMC9Q7Z3E5 817 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 RIC8AQ9NPQ8 531 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 EPS15L1Q9UBC2 864 aa10.82□□□□□ -0.68
COL4A6-210ENST00000621266 RMDN2Q96LZ7 410 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 METTL22Q9BUU2 404 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-210ENST00000621266 NOP53Q9NZM5 478 aaKnown RBP10.81□□□□□ -0.68
COL4A6-210ENST00000621266 SNX14Q9Y5W7 946 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 ZCCHC11Q5TAX3 1644 aaKnown RBP10.81□□□□□ -0.68
COL4A6-210ENST00000621266 TCP10L2B9ZVM9 353 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 SLC27A2O14975 620 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 AFF2P51816 1311 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 NR1I2O75469 434 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 FAM196AQ6ZSG2 479 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-210ENST00000621266 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 SUFUQ9UMX1 484 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 CTNND1O60716 968 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms