RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 NCLP19338 710 aaKnown RBP14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 U2AF2P26368 475 aaKnown RBP eCLIP14.33□□□□□ -0.112e-16■■■■□ 24.9
TNFAIP3-211ENST00000621150 GRM4Q14833 912 aa14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 CAVIN1Q6NZI2 390 aaKnown RBP14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 CMTR1Q8N1G2 835 aaKnown RBP14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 PNMA1Q8ND90 353 aa14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 USP28Q96RU2 1077 aa14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 DHX36Q9H2U1 1008 aaKnown RBP14.33□□□□□ -0.11
TNFAIP3-211ENST00000621150 TBC1D12O60347 775 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 RFC5P40937 340 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 VGLL4Q14135 290 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 ZSCAN23Q3MJ62 389 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 OPTNQ96CV9 577 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 CFAP45Q9UL16 551 aa14.33□□□□□ -0.12
TNFAIP3-211ENST00000621150 DDTLA6NHG4 134 aaPredicted RBP14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 ENTPD3O75355 529 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 MMP1P03956 469 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 RGS19P49795 217 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 GLMNQ92990 594 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 CEP95Q96GE4 821 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 PTPN18Q99952 460 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 RTEL1Q9NZ71 1219 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
TNFAIP3-211ENST00000621150 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 AKR1B1P15121 316 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 GAS2L3Q86XJ1 694 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 FAM151AQ8WW52 585 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 DDX12PQ92771 950 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 FTOQ9C0B1 505 aaKnown RBP eCLIP14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 MTMR4Q9NYA4 1195 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 USTQ9Y2C2 406 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 CSADQ9Y600 493 aa14.31□□□□□ -0.12
TNFAIP3-211ENST00000621150 FKTNO75072 461 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 HLA-DOAP06340 250 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 CDK11BP21127 795 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 KIF5BP33176 963 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 NPY5RQ15761 445 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 TATDN1Q6P1N9 297 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 ZNF396Q96N95 335 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 BRCA2P51587 3418 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 SLURP2P0DP57 97 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 TOP1P11387 765 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 STAG2Q8N3U4 1231 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 LINC00301Q8NCQ3 95 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 ZKSCAN4Q969J2 545 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 PBXIP1Q96AQ6 731 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 PHOX2BQ99453 314 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 PHF20Q9BVI0 1012 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 SNCAIPQ9Y6H5 919 aa14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 V9GY48 417 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-211ENST00000621150 POM121CA8CG34 1229 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 CYTH3O43739 400 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 YEATS4O95619 227 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 TCP10Q12799 353 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 MIGA2Q7L4E1 593 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 CCDC17Q96LX7 622 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 FOXP1Q9H334 677 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
TNFAIP3-211ENST00000621150 SMARCA1P28370 1054 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 GNAQP50148 359 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 CRHR2Q13324 411 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 TRIM29Q14134 588 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 PFKFB3Q16875 520 aaPredicted RBP14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 DCAF15Q66K64 600 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 DIS3L2Q8IYB7 885 aaKnown RBP14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 TMC2Q8TDI7 906 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 TNFRSF25Q93038 417 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
TNFAIP3-211ENST00000621150 BTBD18B2RXH4 712 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 LIG1P18858 919 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 CLK2P49760 499 aaKnown RBP14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 GTF2A2P52657 109 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 MLLT1Q03111 559 aaPredicted RBP14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 PTPAQ15257 358 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 RASGRP2Q7LDG7 609 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 ERO1BQ86YB8 467 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 NOSTRINQ8IVI9 506 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 BRI3BPQ8WY22 251 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 SPZ1Q9BXG8 430 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms